Protein–RNA interactions for Protein: P16298

PPP3CB, Serine/threonine-protein phosphatase 2B catalytic subunit beta isoform, humanhuman

Predictions only

Length 524 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CBP16298 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
PPP3CBP16298 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
PPP3CBP16298 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
PPP3CBP16298 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 AC126177.1-201ENST00000547829 2218 ntBASIC14.57□□□□□ -0.08
PPP3CBP16298 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
PPP3CBP16298 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PPP3CBP16298 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
PPP3CBP16298 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.57□□□□□ -0.08
PPP3CBP16298 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 PTMS-202ENST00000389462 773 ntTSL 2 BASIC14.57□□□□□ -0.08
PPP3CBP16298 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC14.57□□□□□ -0.08
PPP3CBP16298 KRT18P34-201ENST00000488218 1270 ntBASIC14.57□□□□□ -0.08
PPP3CBP16298 SLBP-205ENST00000488267 987 ntTSL 2 BASIC14.57□□□□□ -0.08
PPP3CBP16298 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.57□□□□□ -0.08
PPP3CBP16298 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.57□□□□□ -0.08
PPP3CBP16298 LINC01225-203ENST00000563550 1244 ntBASIC14.57□□□□□ -0.08
PPP3CBP16298 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
PPP3CBP16298 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.57□□□□□ -0.08
PPP3CBP16298 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.57□□□□□ -0.08
PPP3CBP16298 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
PPP3CBP16298 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
PPP3CBP16298 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.57□□□□□ -0.08
PPP3CBP16298 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 HARS-204ENST00000438307 1789 ntTSL 2 BASIC14.57□□□□□ -0.08
PPP3CBP16298 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC14.57□□□□□ -0.08
PPP3CBP16298 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
PPP3CBP16298 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP3CBP16298 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
PPP3CBP16298 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.56□□□□□ -0.08
PPP3CBP16298 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.56□□□□□ -0.08
PPP3CBP16298 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.56□□□□□ -0.08
PPP3CBP16298 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP3CBP16298 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.56□□□□□ -0.08
PPP3CBP16298 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.56□□□□□ -0.08
PPP3CBP16298 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.56□□□□□ -0.08
PPP3CBP16298 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP3CBP16298 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PPP3CBP16298 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP3CBP16298 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP3CBP16298 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
PPP3CBP16298 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.56□□□□□ -0.08
PPP3CBP16298 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.56□□□□□ -0.08
PPP3CBP16298 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.56□□□□□ -0.08
PPP3CBP16298 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP3CBP16298 RBPMS2P1-201ENST00000437762 623 ntBASIC14.56□□□□□ -0.08
PPP3CBP16298 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC14.56□□□□□ -0.08
PPP3CBP16298 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.56□□□□□ -0.08
PPP3CBP16298 RNA5SP421-201ENST00000516864 134 ntBASIC14.56□□□□□ -0.08
PPP3CBP16298 AP002490.2-201ENST00000524791 560 ntBASIC14.56□□□□□ -0.08
PPP3CBP16298 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
PPP3CBP16298 AC069262.1-201ENST00000539058 672 ntBASIC14.56□□□□□ -0.08
PPP3CBP16298 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC14.56□□□□□ -0.08
PPP3CBP16298 MIR3197-201ENST00000582241 73 ntBASIC14.56□□□□□ -0.08
PPP3CBP16298 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP3CBP16298 AC092364.2-202ENST00000597012 1073 ntBASIC14.56□□□□□ -0.08
PPP3CBP16298 AC093512.1-201ENST00000617969 520 ntBASIC14.56□□□□□ -0.08
PPP3CBP16298 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.56□□□□□ -0.08
PPP3CBP16298 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP3CBP16298 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.56□□□□□ -0.08
PPP3CBP16298 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC14.56□□□□□ -0.08
PPP3CBP16298 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC14.56□□□□□ -0.08
PPP3CBP16298 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP3CBP16298 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP3CBP16298 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
PPP3CBP16298 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP3CBP16298 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
PPP3CBP16298 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.56□□□□□ -0.08
PPP3CBP16298 NORAD-201ENST00000565493 5339 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms