Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 FES-204ENST00000414248 2327 ntTSL 2 BASIC16.28■□□□□ 0.2
THRAP10827 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
THRAP10827 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
THRAP10827 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.28■□□□□ 0.2
THRAP10827 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.28■□□□□ 0.2
THRAP10827 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 HLA-J-203ENST00000494367 1087 ntBASIC16.28■□□□□ 0.2
THRAP10827 FAM86C2P-203ENST00000528684 1004 ntBASIC16.28■□□□□ 0.2
THRAP10827 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.28■□□□□ 0.2
THRAP10827 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.28■□□□□ 0.2
THRAP10827 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.28■□□□□ 0.2
THRAP10827 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.28■□□□□ 0.2
THRAP10827 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
THRAP10827 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.28■□□□□ 0.2
THRAP10827 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
THRAP10827 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
THRAP10827 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THRAP10827 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.27■□□□□ 0.2
THRAP10827 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
THRAP10827 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.27■□□□□ 0.2
THRAP10827 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
THRAP10827 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
THRAP10827 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
THRAP10827 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
THRAP10827 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
THRAP10827 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THRAP10827 NORAD-201ENST00000565493 5339 ntBASIC16.27■□□□□ 0.2
THRAP10827 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THRAP10827 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.27■□□□□ 0.2
THRAP10827 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
THRAP10827 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THRAP10827 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
THRAP10827 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THRAP10827 AL671277.1-201ENST00000429656 993 ntBASIC16.27■□□□□ 0.2
THRAP10827 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.27■□□□□ 0.2
THRAP10827 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
THRAP10827 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.27■□□□□ 0.2
THRAP10827 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.27■□□□□ 0.2
THRAP10827 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.27■□□□□ 0.2
THRAP10827 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.27■□□□□ 0.2
THRAP10827 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.27■□□□□ 0.2
THRAP10827 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.27■□□□□ 0.2
THRAP10827 AC004449.1-201ENST00000564240 433 ntBASIC16.27■□□□□ 0.2
THRAP10827 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.27■□□□□ 0.2
THRAP10827 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.27■□□□□ 0.2
THRAP10827 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
THRAP10827 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.27■□□□□ 0.2
THRAP10827 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THRAP10827 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THRAP10827 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
THRAP10827 AC068587.6-202ENST00000641839 5619 ntBASIC16.27■□□□□ 0.19
THRAP10827 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.27■□□□□ 0.19
THRAP10827 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
THRAP10827 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.27■□□□□ 0.19
THRAP10827 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THRAP10827 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
THRAP10827 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THRAP10827 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
THRAP10827 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
THRAP10827 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
THRAP10827 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.27■□□□□ 0.19
THRAP10827 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.27■□□□□ 0.19
THRAP10827 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
THRAP10827 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.26■□□□□ 0.19
THRAP10827 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.26■□□□□ 0.19
THRAP10827 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
THRAP10827 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.26■□□□□ 0.19
THRAP10827 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.26■□□□□ 0.19
THRAP10827 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 AL627223.1-201ENST00000416693 442 ntBASIC16.26■□□□□ 0.19
THRAP10827 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.26■□□□□ 0.19
THRAP10827 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.26■□□□□ 0.19
THRAP10827 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.26■□□□□ 0.19
THRAP10827 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.26■□□□□ 0.19
THRAP10827 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.26■□□□□ 0.19
THRAP10827 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 LINC02228-204ENST00000642115 2962 ntBASIC16.26■□□□□ 0.19
THRAP10827 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
THRAP10827 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms