Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RARAP10276 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.98■□□□□ 0.31
RARAP10276 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RARAP10276 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RARAP10276 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RARAP10276 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.98■□□□□ 0.31
RARAP10276 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RARAP10276 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RARAP10276 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
RARAP10276 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.98■□□□□ 0.31
RARAP10276 PPT1-215ENST00000641471 2368 ntBASIC16.97■□□□□ 0.31
RARAP10276 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RARAP10276 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.97■□□□□ 0.31
RARAP10276 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
RARAP10276 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.97■□□□□ 0.31
RARAP10276 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RARAP10276 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
RARAP10276 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RARAP10276 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RARAP10276 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 FAM58CP-201ENST00000435741 640 ntBASIC16.97■□□□□ 0.31
RARAP10276 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RARAP10276 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.97■□□□□ 0.31
RARAP10276 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.97■□□□□ 0.31
RARAP10276 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.97■□□□□ 0.31
RARAP10276 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.97■□□□□ 0.31
RARAP10276 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.97■□□□□ 0.31
RARAP10276 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC16.97■□□□□ 0.31
RARAP10276 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RARAP10276 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
RARAP10276 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RARAP10276 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
RARAP10276 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RARAP10276 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RARAP10276 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.96■□□□□ 0.31
RARAP10276 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RARAP10276 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.96■□□□□ 0.31
RARAP10276 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC16.96■□□□□ 0.31
RARAP10276 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC16.96■□□□□ 0.31
RARAP10276 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.96■□□□□ 0.31
RARAP10276 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 AL355306.1-201ENST00000415580 579 ntBASIC16.96■□□□□ 0.31
RARAP10276 MCCD1P2-201ENST00000423228 335 ntBASIC16.96■□□□□ 0.31
RARAP10276 AL671277.1-201ENST00000429656 993 ntBASIC16.96■□□□□ 0.31
RARAP10276 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.96■□□□□ 0.31
RARAP10276 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.96■□□□□ 0.31
RARAP10276 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
RARAP10276 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RARAP10276 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
RARAP10276 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.96■□□□□ 0.31
RARAP10276 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RARAP10276 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RARAP10276 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
RARAP10276 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
RARAP10276 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
RARAP10276 AKAP8P1-201ENST00000434743 1349 ntBASIC16.96■□□□□ 0.3
RARAP10276 PMS2P7-201ENST00000506558 1336 ntBASIC16.96■□□□□ 0.3
RARAP10276 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RARAP10276 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RARAP10276 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RARAP10276 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RARAP10276 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RARAP10276 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RARAP10276 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RARAP10276 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RARAP10276 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms