Protein–RNA interactions for Protein: P0DP02

IGHV3-30-3, Immunoglobulin heavy variable 3-30-3, humanhuman

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-30-3P0DP02 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
IGHV3-30-3P0DP02 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC11.54□□□□□ -0.56
IGHV3-30-3P0DP02 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
IGHV3-30-3P0DP02 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC11.54□□□□□ -0.56
IGHV3-30-3P0DP02 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IGHV3-30-3P0DP02 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
IGHV3-30-3P0DP02 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
IGHV3-30-3P0DP02 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
IGHV3-30-3P0DP02 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC11.54□□□□□ -0.56
IGHV3-30-3P0DP02 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
IGHV3-30-3P0DP02 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC11.54□□□□□ -0.56
IGHV3-30-3P0DP02 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
IGHV3-30-3P0DP02 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
IGHV3-30-3P0DP02 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 TNRC18P2-201ENST00000417666 2714 ntBASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 KRT8P49-201ENST00000604166 1432 ntBASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 MIR940-201ENST00000401276 94 ntBASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 AC007967.2-201ENST00000432613 625 ntBASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 AC009947.1-201ENST00000444350 727 ntBASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 IGHV3-22-201ENST00000520721 359 ntBASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 CD63-210ENST00000550776 870 ntTSL 5 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 AC010654.1-201ENST00000615722 808 ntBASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 AC013268.4-201ENST00000637413 2228 ntBASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 ZNF259P1-201ENST00000407656 1365 ntBASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
IGHV3-30-3P0DP02 AP005117.1-202ENST00000581724 1908 ntBASIC11.52□□□□□ -0.56
IGHV3-30-3P0DP02 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC11.52□□□□□ -0.56
IGHV3-30-3P0DP02 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
IGHV3-30-3P0DP02 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC11.52□□□□□ -0.56
IGHV3-30-3P0DP02 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.52□□□□□ -0.56
IGHV3-30-3P0DP02 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
IGHV3-30-3P0DP02 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC11.52□□□□□ -0.56
IGHV3-30-3P0DP02 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
IGHV3-30-3P0DP02 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
IGHV3-30-3P0DP02 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
IGHV3-30-3P0DP02 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
IGHV3-30-3P0DP02 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
IGHV3-30-3P0DP02 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
IGHV3-30-3P0DP02 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
IGHV3-30-3P0DP02 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
IGHV3-30-3P0DP02 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
IGHV3-30-3P0DP02 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
IGHV3-30-3P0DP02 SP100-205ENST00000409824 1802 ntTSL 5 BASIC11.52□□□□□ -0.57
IGHV3-30-3P0DP02 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms