Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC9.84□□□□□ -0.83
APOBP04114 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC9.84□□□□□ -0.83
APOBP04114 IQSEC3P1-201ENST00000538799 536 ntBASIC9.84□□□□□ -0.83
APOBP04114 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC9.84□□□□□ -0.83
APOBP04114 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 AC078925.2-201ENST00000624013 1973 ntBASIC9.84□□□□□ -0.83
APOBP04114 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC9.84□□□□□ -0.83
APOBP04114 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC9.84□□□□□ -0.83
APOBP04114 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC9.84□□□□□ -0.83
APOBP04114 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC9.84□□□□□ -0.83
APOBP04114 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC9.84□□□□□ -0.83
APOBP04114 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
APOBP04114 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC9.84□□□□□ -0.83
APOBP04114 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC9.84□□□□□ -0.83
APOBP04114 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
APOBP04114 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC9.83□□□□□ -0.84
APOBP04114 MIR1202-201ENST00000408529 83 ntBASIC9.83□□□□□ -0.84
APOBP04114 AC025181.2-201ENST00000606994 802 ntBASIC9.83□□□□□ -0.84
APOBP04114 YRDCP1-201ENST00000621419 643 ntBASIC9.83□□□□□ -0.84
APOBP04114 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC9.83□□□□□ -0.84
APOBP04114 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC9.83□□□□□ -0.84
APOBP04114 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC9.83□□□□□ -0.84
APOBP04114 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC9.83□□□□□ -0.84
APOBP04114 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC9.83□□□□□ -0.84
APOBP04114 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC9.83□□□□□ -0.84
APOBP04114 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC9.83□□□□□ -0.84
APOBP04114 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
APOBP04114 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC9.83□□□□□ -0.84
APOBP04114 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
APOBP04114 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC9.83□□□□□ -0.84
APOBP04114 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC9.83□□□□□ -0.84
APOBP04114 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC9.83□□□□□ -0.84
APOBP04114 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 AL023775.1-201ENST00000454907 1746 ntBASIC9.83□□□□□ -0.84
APOBP04114 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC9.83□□□□□ -0.84
APOBP04114 AC137723.1-201ENST00000584705 709 ntTSL 3 BASIC9.83□□□□□ -0.84
APOBP04114 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 WDR7-208ENST00000589935 544 ntTSL 4 BASIC9.83□□□□□ -0.84
APOBP04114 AC022748.3-201ENST00000621828 275 ntBASIC9.83□□□□□ -0.84
APOBP04114 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC9.83□□□□□ -0.84
APOBP04114 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC9.83□□□□□ -0.84
APOBP04114 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 AC148477.4-201ENST00000613430 1793 ntBASIC9.83□□□□□ -0.84
APOBP04114 TUBBP5-203ENST00000508529 1334 ntBASIC9.83□□□□□ -0.84
APOBP04114 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC9.83□□□□□ -0.84
APOBP04114 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
APOBP04114 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 AP001582.1-201ENST00000525856 295 ntBASIC9.83□□□□□ -0.84
APOBP04114 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC9.83□□□□□ -0.84
APOBP04114 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC9.83□□□□□ -0.84
APOBP04114 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 AP000346.4-201ENST00000614827 381 ntBASIC9.83□□□□□ -0.84
APOBP04114 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC9.83□□□□□ -0.84
APOBP04114 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC9.83□□□□□ -0.84
APOBP04114 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC9.83□□□□□ -0.84
APOBP04114 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC9.83□□□□□ -0.84
APOBP04114 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC9.82□□□□□ -0.84
APOBP04114 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC9.82□□□□□ -0.84
APOBP04114 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 AC245100.5-201ENST00000452108 331 ntBASIC9.82□□□□□ -0.84
APOBP04114 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC9.82□□□□□ -0.84
APOBP04114 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
APOBP04114 HLA-C-210ENST00000640219 976 ntBASIC9.82□□□□□ -0.84
APOBP04114 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC9.82□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms