Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.38□□□□□ -0.11
APOC1P02654 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.38□□□□□ -0.11
APOC1P02654 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
APOC1P02654 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
APOC1P02654 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.38□□□□□ -0.11
APOC1P02654 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.38□□□□□ -0.11
APOC1P02654 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
APOC1P02654 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC14.38□□□□□ -0.11
APOC1P02654 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.38□□□□□ -0.11
APOC1P02654 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
APOC1P02654 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
APOC1P02654 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
APOC1P02654 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
APOC1P02654 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 REXO1L8P-201ENST00000604378 1897 ntBASIC14.38□□□□□ -0.11
APOC1P02654 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
APOC1P02654 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.37□□□□□ -0.11
APOC1P02654 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
APOC1P02654 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
APOC1P02654 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
APOC1P02654 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
APOC1P02654 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 AL592424.1-201ENST00000563624 1536 ntBASIC14.37□□□□□ -0.11
APOC1P02654 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
APOC1P02654 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.37□□□□□ -0.11
APOC1P02654 AC009947.1-201ENST00000444350 727 ntBASIC14.37□□□□□ -0.11
APOC1P02654 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC14.37□□□□□ -0.11
APOC1P02654 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
APOC1P02654 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 AC109635.5-201ENST00000533593 962 ntBASIC14.37□□□□□ -0.11
APOC1P02654 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.37□□□□□ -0.11
APOC1P02654 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.37□□□□□ -0.11
APOC1P02654 AC023141.13-201ENST00000604991 943 ntBASIC14.37□□□□□ -0.11
APOC1P02654 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
APOC1P02654 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.37□□□□□ -0.11
APOC1P02654 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
APOC1P02654 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.37□□□□□ -0.11
APOC1P02654 AC005622.1-201ENST00000636801 1703 ntBASIC14.37□□□□□ -0.11
APOC1P02654 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
APOC1P02654 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
APOC1P02654 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
APOC1P02654 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
APOC1P02654 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.36□□□□□ -0.11
APOC1P02654 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
APOC1P02654 CICP4-201ENST00000447359 2812 ntBASIC14.36□□□□□ -0.11
APOC1P02654 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
APOC1P02654 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
APOC1P02654 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.36□□□□□ -0.11
APOC1P02654 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
APOC1P02654 HCG4B-203ENST00000450128 991 ntBASIC14.36□□□□□ -0.11
APOC1P02654 KRT18P34-201ENST00000488218 1270 ntBASIC14.36□□□□□ -0.11
APOC1P02654 RNA5SP415-201ENST00000517246 115 ntBASIC14.36□□□□□ -0.11
APOC1P02654 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.36□□□□□ -0.11
APOC1P02654 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms