Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
APOA1P02647 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC14.49□□□□□ -0.09
APOA1P02647 KLF4P1-201ENST00000412782 1185 ntBASIC14.49□□□□□ -0.09
APOA1P02647 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.49□□□□□ -0.09
APOA1P02647 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC14.49□□□□□ -0.09
APOA1P02647 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC14.49□□□□□ -0.09
APOA1P02647 AC004817.3-201ENST00000602957 2129 ntBASIC14.49□□□□□ -0.09
APOA1P02647 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.49□□□□□ -0.09
APOA1P02647 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
APOA1P02647 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.49□□□□□ -0.09
APOA1P02647 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.49□□□□□ -0.09
APOA1P02647 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.49□□□□□ -0.09
APOA1P02647 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
APOA1P02647 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
APOA1P02647 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC14.49□□□□□ -0.09
APOA1P02647 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC14.49□□□□□ -0.09
APOA1P02647 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.49□□□□□ -0.09
APOA1P02647 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
APOA1P02647 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA1P02647 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
APOA1P02647 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA1P02647 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.48□□□□□ -0.09
APOA1P02647 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 AL390755.1-201ENST00000623716 2027 ntBASIC14.48□□□□□ -0.09
APOA1P02647 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC14.48□□□□□ -0.09
APOA1P02647 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA1P02647 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
APOA1P02647 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA1P02647 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC14.48□□□□□ -0.09
APOA1P02647 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.48□□□□□ -0.09
APOA1P02647 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA1P02647 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
APOA1P02647 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC14.48□□□□□ -0.09
APOA1P02647 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA1P02647 AL390719.2-201ENST00000606993 987 ntBASIC14.48□□□□□ -0.09
APOA1P02647 SPEG-225ENST00000617028 815 ntTSL 5 BASIC14.48□□□□□ -0.09
APOA1P02647 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
APOA1P02647 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA1P02647 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
APOA1P02647 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
APOA1P02647 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
APOA1P02647 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA1P02647 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA1P02647 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.48□□□□□ -0.09
APOA1P02647 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
APOA1P02647 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
APOA1P02647 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
APOA1P02647 AC132938.5-201ENST00000624980 1813 ntBASIC14.48□□□□□ -0.09
APOA1P02647 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOA1P02647 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOA1P02647 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.47□□□□□ -0.09
APOA1P02647 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
APOA1P02647 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.47□□□□□ -0.09
APOA1P02647 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
APOA1P02647 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.47□□□□□ -0.09
APOA1P02647 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC14.47□□□□□ -0.09
APOA1P02647 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOA1P02647 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
APOA1P02647 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOA1P02647 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
APOA1P02647 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOA1P02647 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
APOA1P02647 AP002414.1-201ENST00000391405 1147 ntBASIC14.47□□□□□ -0.09
APOA1P02647 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.47□□□□□ -0.09
APOA1P02647 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.47□□□□□ -0.09
APOA1P02647 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC14.47□□□□□ -0.09
APOA1P02647 FAM201B-201ENST00000458407 597 ntBASIC14.47□□□□□ -0.09
APOA1P02647 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOA1P02647 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
APOA1P02647 AC005332.3-201ENST00000589904 676 ntBASIC14.47□□□□□ -0.09
APOA1P02647 AL138831.2-201ENST00000606564 490 ntBASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms