Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 CLK3P2-201ENST00000427566 1453 ntBASIC17.34■□□□□ 0.37
CSPG5O95196 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSPG5O95196 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSPG5O95196 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSPG5O95196 AC119751.2-201ENST00000504529 210 ntBASIC17.34■□□□□ 0.37
CSPG5O95196 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CSPG5O95196 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.34■□□□□ 0.37
CSPG5O95196 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CSPG5O95196 NOP2-211ENST00000540228 668 ntTSL 2 BASIC17.34■□□□□ 0.37
CSPG5O95196 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC17.34■□□□□ 0.37
CSPG5O95196 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CSPG5O95196 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.34■□□□□ 0.37
CSPG5O95196 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC17.34■□□□□ 0.37
CSPG5O95196 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.34■□□□□ 0.37
CSPG5O95196 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.34■□□□□ 0.37
CSPG5O95196 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.34■□□□□ 0.37
CSPG5O95196 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC17.34■□□□□ 0.37
CSPG5O95196 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.34■□□□□ 0.37
CSPG5O95196 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSPG5O95196 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.34■□□□□ 0.37
CSPG5O95196 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.34■□□□□ 0.37
CSPG5O95196 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.34■□□□□ 0.37
CSPG5O95196 GPR182-203ENST00000622922 591 ntBASIC17.34■□□□□ 0.37
CSPG5O95196 AC018695.7-201ENST00000624587 2492 ntBASIC17.34■□□□□ 0.37
CSPG5O95196 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CSPG5O95196 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSPG5O95196 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CSPG5O95196 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSPG5O95196 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSPG5O95196 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CSPG5O95196 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSPG5O95196 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CSPG5O95196 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CSPG5O95196 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSPG5O95196 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
CSPG5O95196 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CSPG5O95196 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CSPG5O95196 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSPG5O95196 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSPG5O95196 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
CSPG5O95196 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CSPG5O95196 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.33■□□□□ 0.37
CSPG5O95196 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CSPG5O95196 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CSPG5O95196 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC17.33■□□□□ 0.37
CSPG5O95196 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.33■□□□□ 0.36
CSPG5O95196 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.33■□□□□ 0.36
CSPG5O95196 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSPG5O95196 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CSPG5O95196 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.33■□□□□ 0.36
CSPG5O95196 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSPG5O95196 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSPG5O95196 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSPG5O95196 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSPG5O95196 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSPG5O95196 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSPG5O95196 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.33■□□□□ 0.36
CSPG5O95196 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CSPG5O95196 ORC6-206ENST00000568364 888 ntTSL 5 BASIC17.33■□□□□ 0.36
CSPG5O95196 MIR4525-201ENST00000580000 75 ntBASIC17.33■□□□□ 0.36
CSPG5O95196 MIR4538-201ENST00000581377 78 ntBASIC17.33■□□□□ 0.36
CSPG5O95196 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
CSPG5O95196 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.33■□□□□ 0.36
CSPG5O95196 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.33■□□□□ 0.36
CSPG5O95196 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CSPG5O95196 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.33■□□□□ 0.36
CSPG5O95196 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.33■□□□□ 0.36
CSPG5O95196 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CSPG5O95196 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSPG5O95196 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSPG5O95196 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSPG5O95196 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CSPG5O95196 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CSPG5O95196 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.33■□□□□ 0.36
CSPG5O95196 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSPG5O95196 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CSPG5O95196 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSPG5O95196 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSPG5O95196 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSPG5O95196 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CSPG5O95196 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CSPG5O95196 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.32■□□□□ 0.36
CSPG5O95196 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CSPG5O95196 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CSPG5O95196 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSPG5O95196 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSPG5O95196 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSPG5O95196 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSPG5O95196 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CSPG5O95196 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CSPG5O95196 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSPG5O95196 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.32■□□□□ 0.36
CSPG5O95196 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CSPG5O95196 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.32■□□□□ 0.36
CSPG5O95196 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CSPG5O95196 ZNF890P-202ENST00000530367 1156 ntBASIC17.32■□□□□ 0.36
CSPG5O95196 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.32■□□□□ 0.36
CSPG5O95196 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.32■□□□□ 0.36
CSPG5O95196 AC008735.3-201ENST00000596646 500 ntBASIC17.32■□□□□ 0.36
CSPG5O95196 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms