Protein–RNA interactions for Protein: O94985

CLSTN1, Calsyntenin-1, humanhuman

Predictions only

Length 981 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1O94985 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.98■□□□□ 0.47
CLSTN1O94985 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC17.98■□□□□ 0.47
CLSTN1O94985 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
CLSTN1O94985 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CLSTN1O94985 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.97■□□□□ 0.47
CLSTN1O94985 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
CLSTN1O94985 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
CLSTN1O94985 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.97■□□□□ 0.47
CLSTN1O94985 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC17.97■□□□□ 0.47
CLSTN1O94985 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 RNU1-129P-201ENST00000384064 167 ntBASIC17.97■□□□□ 0.47
CLSTN1O94985 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.97■□□□□ 0.47
CLSTN1O94985 HNRNPA1P28-201ENST00000424481 961 ntBASIC17.97■□□□□ 0.47
CLSTN1O94985 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.97■□□□□ 0.47
CLSTN1O94985 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
CLSTN1O94985 AC112191.1-201ENST00000523689 701 ntBASIC17.97■□□□□ 0.47
CLSTN1O94985 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC17.97■□□□□ 0.47
CLSTN1O94985 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.97■□□□□ 0.47
CLSTN1O94985 MIR3687-2-201ENST00000577708 61 ntBASIC17.97■□□□□ 0.47
CLSTN1O94985 U1.21-201ENST00000580816 167 ntBASIC17.97■□□□□ 0.47
CLSTN1O94985 MIR4492-201ENST00000581627 80 ntBASIC17.97■□□□□ 0.47
CLSTN1O94985 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.97■□□□□ 0.47
CLSTN1O94985 MIR3687-1-201ENST00000614492 61 ntBASIC17.97■□□□□ 0.47
CLSTN1O94985 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.97■□□□□ 0.47
CLSTN1O94985 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.97■□□□□ 0.47
CLSTN1O94985 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CLSTN1O94985 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CLSTN1O94985 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 AC006538.1-201ENST00000567905 1585 ntBASIC17.96■□□□□ 0.47
CLSTN1O94985 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.96■□□□□ 0.47
CLSTN1O94985 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLSTN1O94985 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC17.96■□□□□ 0.47
CLSTN1O94985 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC17.96■□□□□ 0.47
CLSTN1O94985 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.96■□□□□ 0.47
CLSTN1O94985 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.96■□□□□ 0.47
CLSTN1O94985 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC17.96■□□□□ 0.47
CLSTN1O94985 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.96■□□□□ 0.47
CLSTN1O94985 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLSTN1O94985 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.96■□□□□ 0.47
CLSTN1O94985 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLSTN1O94985 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CLSTN1O94985 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC17.96■□□□□ 0.47
CLSTN1O94985 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.96■□□□□ 0.47
CLSTN1O94985 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CLSTN1O94985 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CLSTN1O94985 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLSTN1O94985 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLSTN1O94985 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLSTN1O94985 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLSTN1O94985 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLSTN1O94985 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CLSTN1O94985 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLSTN1O94985 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLSTN1O94985 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLSTN1O94985 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLSTN1O94985 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLSTN1O94985 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLSTN1O94985 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLSTN1O94985 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CLSTN1O94985 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLSTN1O94985 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.95■□□□□ 0.46
CLSTN1O94985 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CLSTN1O94985 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
CLSTN1O94985 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLSTN1O94985 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLSTN1O94985 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLSTN1O94985 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms