Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LTN1O94822 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC20.99■□□□□ 0.95
LTN1O94822 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC20.99■□□□□ 0.95
LTN1O94822 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC20.99■□□□□ 0.95
LTN1O94822 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LTN1O94822 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LTN1O94822 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC20.99■□□□□ 0.95
LTN1O94822 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
LTN1O94822 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
LTN1O94822 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LTN1O94822 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC20.99■□□□□ 0.95
LTN1O94822 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LTN1O94822 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
LTN1O94822 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC20.98■□□□□ 0.95
LTN1O94822 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC20.98■□□□□ 0.95
LTN1O94822 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LTN1O94822 MTX1P1-201ENST00000440904 838 ntBASIC20.98■□□□□ 0.95
LTN1O94822 CNN2P10-201ENST00000443067 918 ntBASIC20.98■□□□□ 0.95
LTN1O94822 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LTN1O94822 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LTN1O94822 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LTN1O94822 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LTN1O94822 AC022188.1-201ENST00000620960 1664 ntBASIC20.98■□□□□ 0.95
LTN1O94822 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
LTN1O94822 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC20.98■□□□□ 0.95
LTN1O94822 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LTN1O94822 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
LTN1O94822 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
LTN1O94822 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC20.98■□□□□ 0.95
LTN1O94822 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC20.98■□□□□ 0.95
LTN1O94822 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
LTN1O94822 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
LTN1O94822 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LTN1O94822 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LTN1O94822 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LTN1O94822 RAC2-202ENST00000401529 569 ntTSL 4 BASIC20.97■□□□□ 0.95
LTN1O94822 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
LTN1O94822 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC20.97■□□□□ 0.95
LTN1O94822 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LTN1O94822 AL139099.5-201ENST00000635274 300 ntBASIC20.97■□□□□ 0.95
LTN1O94822 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LTN1O94822 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LTN1O94822 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
LTN1O94822 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
LTN1O94822 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC20.97■□□□□ 0.95
LTN1O94822 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LTN1O94822 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LTN1O94822 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
LTN1O94822 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC20.97■□□□□ 0.95
LTN1O94822 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LTN1O94822 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
LTN1O94822 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
LTN1O94822 HNRNPA1P48-202ENST00000565308 961 ntBASIC20.97■□□□□ 0.95
LTN1O94822 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC20.97■□□□□ 0.95
LTN1O94822 AC138951.2-201ENST00000623455 1161 ntBASIC20.97■□□□□ 0.95
LTN1O94822 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
LTN1O94822 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LTN1O94822 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
LTN1O94822 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
LTN1O94822 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LTN1O94822 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC20.96■□□□□ 0.95
LTN1O94822 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LTN1O94822 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
LTN1O94822 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LTN1O94822 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC20.96■□□□□ 0.95
LTN1O94822 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LTN1O94822 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
LTN1O94822 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LTN1O94822 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC20.96■□□□□ 0.95
LTN1O94822 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LTN1O94822 AC078819.1-201ENST00000547454 765 ntBASIC20.96■□□□□ 0.95
LTN1O94822 AC012085.1-201ENST00000548270 765 ntBASIC20.96■□□□□ 0.95
LTN1O94822 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC20.96■□□□□ 0.95
LTN1O94822 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC20.96■□□□□ 0.95
LTN1O94822 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC20.96■□□□□ 0.95
LTN1O94822 PRKN-211ENST00000615065 261 ntTSL 5 BASIC20.96■□□□□ 0.95
LTN1O94822 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC20.96■□□□□ 0.95
LTN1O94822 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
LTN1O94822 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LTN1O94822 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
LTN1O94822 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LTN1O94822 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LTN1O94822 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC20.96■□□□□ 0.95
LTN1O94822 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
LTN1O94822 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
LTN1O94822 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC20.95■□□□□ 0.95
LTN1O94822 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC20.95■□□□□ 0.95
LTN1O94822 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LTN1O94822 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
LTN1O94822 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LTN1O94822 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LTN1O94822 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
LTN1O94822 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
LTN1O94822 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
LTN1O94822 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC20.95■□□□□ 0.94
LTN1O94822 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
LTN1O94822 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.95■□□□□ 0.94
LTN1O94822 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC20.95■□□□□ 0.94
LTN1O94822 AC009486.1-201ENST00000569860 813 ntBASIC20.95■□□□□ 0.94
LTN1O94822 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms