Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCL13O43927 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCL13O43927 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.46□□□□□ -0.09
CXCL13O43927 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCL13O43927 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCL13O43927 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CXCL13O43927 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CXCL13O43927 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.46□□□□□ -0.09
CXCL13O43927 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCL13O43927 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.46□□□□□ -0.09
CXCL13O43927 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCL13O43927 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
CXCL13O43927 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.46□□□□□ -0.09
CXCL13O43927 SYS1-203ENST00000414310 795 ntTSL 3 BASIC14.46□□□□□ -0.09
CXCL13O43927 AC092580.3-201ENST00000430932 139 ntBASIC14.46□□□□□ -0.09
CXCL13O43927 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCL13O43927 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCL13O43927 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
CXCL13O43927 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CXCL13O43927 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.46□□□□□ -0.09
CXCL13O43927 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.46□□□□□ -0.09
CXCL13O43927 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.46□□□□□ -0.09
CXCL13O43927 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC14.46□□□□□ -0.09
CXCL13O43927 AL138828.2-201ENST00000615812 383 ntBASIC14.46□□□□□ -0.09
CXCL13O43927 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.46□□□□□ -0.09
CXCL13O43927 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CXCL13O43927 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CXCL13O43927 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCL13O43927 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
CXCL13O43927 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCL13O43927 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCL13O43927 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
CXCL13O43927 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.46□□□□□ -0.09
CXCL13O43927 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CXCL13O43927 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
CXCL13O43927 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CXCL13O43927 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CXCL13O43927 AL136982.4-201ENST00000437689 1740 ntBASIC14.46□□□□□ -0.1
CXCL13O43927 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
CXCL13O43927 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC14.46□□□□□ -0.1
CXCL13O43927 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CXCL13O43927 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CXCL13O43927 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
CXCL13O43927 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CXCL13O43927 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
CXCL13O43927 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
CXCL13O43927 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CXCL13O43927 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
CXCL13O43927 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CXCL13O43927 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCL13O43927 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCL13O43927 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCL13O43927 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCL13O43927 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.45□□□□□ -0.1
CXCL13O43927 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.45□□□□□ -0.1
CXCL13O43927 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 HLA-V-204ENST00000476601 1289 ntBASIC14.45□□□□□ -0.1
CXCL13O43927 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCL13O43927 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC14.45□□□□□ -0.1
CXCL13O43927 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.45□□□□□ -0.1
CXCL13O43927 AL079307.3-201ENST00000556114 283 ntBASIC14.45□□□□□ -0.1
CXCL13O43927 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CXCL13O43927 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
CXCL13O43927 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCL13O43927 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CXCL13O43927 MTHFR-217ENST00000641820 1569 ntBASIC14.45□□□□□ -0.1
CXCL13O43927 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.45□□□□□ -0.1
CXCL13O43927 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
CXCL13O43927 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CXCL13O43927 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
CXCL13O43927 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.45□□□□□ -0.1
CXCL13O43927 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.45□□□□□ -0.1
CXCL13O43927 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL13O43927 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL13O43927 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL13O43927 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL13O43927 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL13O43927 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC14.44□□□□□ -0.1
CXCL13O43927 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL13O43927 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL13O43927 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
CXCL13O43927 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
CXCL13O43927 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL13O43927 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.44□□□□□ -0.1
CXCL13O43927 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CXCL13O43927 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms