Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SLC28A2O43868 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SLC28A2O43868 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SLC28A2O43868 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC28A2O43868 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC15.63■□□□□ 0.09
SLC28A2O43868 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC28A2O43868 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SLC28A2O43868 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC28A2O43868 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SLC28A2O43868 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC28A2O43868 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.63■□□□□ 0.09
SLC28A2O43868 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SLC28A2O43868 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SLC28A2O43868 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC28A2O43868 GPS2P2-201ENST00000430745 888 ntBASIC15.63■□□□□ 0.09
SLC28A2O43868 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC28A2O43868 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.63■□□□□ 0.09
SLC28A2O43868 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC28A2O43868 AC097493.3-201ENST00000509725 367 ntBASIC15.63■□□□□ 0.09
SLC28A2O43868 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.63■□□□□ 0.09
SLC28A2O43868 IGHV3-62-201ENST00000520057 340 ntBASIC15.63■□□□□ 0.09
SLC28A2O43868 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.63■□□□□ 0.09
SLC28A2O43868 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.63■□□□□ 0.09
SLC28A2O43868 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 AL671710.1-201ENST00000610245 2349 ntBASIC15.63■□□□□ 0.09
SLC28A2O43868 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SLC28A2O43868 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SLC28A2O43868 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SLC28A2O43868 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.62■□□□□ 0.09
SLC28A2O43868 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC28A2O43868 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC28A2O43868 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC28A2O43868 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC28A2O43868 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC28A2O43868 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SLC28A2O43868 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC28A2O43868 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC28A2O43868 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC28A2O43868 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC28A2O43868 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC28A2O43868 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.62■□□□□ 0.09
SLC28A2O43868 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC28A2O43868 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
SLC28A2O43868 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC28A2O43868 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC28A2O43868 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC28A2O43868 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SLC28A2O43868 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.62■□□□□ 0.09
SLC28A2O43868 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC28A2O43868 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC28A2O43868 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC15.62■□□□□ 0.09
SLC28A2O43868 RPS2P32-201ENST00000439199 892 ntBASIC15.62■□□□□ 0.09
SLC28A2O43868 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.62■□□□□ 0.09
SLC28A2O43868 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.62■□□□□ 0.09
SLC28A2O43868 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.62■□□□□ 0.09
SLC28A2O43868 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC28A2O43868 MIR6080-201ENST00000617359 66 ntBASIC15.62■□□□□ 0.09
SLC28A2O43868 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SLC28A2O43868 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC28A2O43868 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SLC28A2O43868 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.62■□□□□ 0.09
SLC28A2O43868 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC28A2O43868 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SLC28A2O43868 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.62■□□□□ 0.09
SLC28A2O43868 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.62■□□□□ 0.09
SLC28A2O43868 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC15.62■□□□□ 0.09
SLC28A2O43868 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.62■□□□□ 0.09
SLC28A2O43868 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.62■□□□□ 0.09
SLC28A2O43868 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A2O43868 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A2O43868 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.61■□□□□ 0.09
SLC28A2O43868 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A2O43868 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A2O43868 PCDHA1-201ENST00000378133 2726 ntBASIC15.61■□□□□ 0.09
SLC28A2O43868 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A2O43868 GGT3P-204ENST00000453783 1664 ntBASIC15.61■□□□□ 0.09
SLC28A2O43868 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
SLC28A2O43868 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A2O43868 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SLC28A2O43868 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.61■□□□□ 0.09
SLC28A2O43868 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SLC28A2O43868 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms