Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 RARRES2P9-201ENST00000565168 469 ntBASIC14.41□□□□□ -0.1
TRAF3IP2O43734 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 AP3S2-216ENST00000617003 1561 ntBASIC14.41□□□□□ -0.1
TRAF3IP2O43734 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 AC008741.2-201ENST00000612792 3115 ntBASIC14.41□□□□□ -0.1
TRAF3IP2O43734 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 AC007950.2-201ENST00000615045 2347 ntBASIC14.41□□□□□ -0.1
TRAF3IP2O43734 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAF3IP2O43734 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 AP001282.1-201ENST00000531301 1499 ntBASIC14.4□□□□□ -0.1
TRAF3IP2O43734 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 AC254562.1-201ENST00000417586 456 ntBASIC14.4□□□□□ -0.1
TRAF3IP2O43734 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 GPS2P2-201ENST00000430745 888 ntBASIC14.4□□□□□ -0.1
TRAF3IP2O43734 AC004967.1-201ENST00000453589 447 ntBASIC14.4□□□□□ -0.1
TRAF3IP2O43734 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 GPALPP1-207ENST00000611650 899 ntBASIC14.4□□□□□ -0.1
TRAF3IP2O43734 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 AC009093.7-201ENST00000623853 1223 ntBASIC14.4□□□□□ -0.1
TRAF3IP2O43734 AC134684.3-201ENST00000641758 218 ntBASIC14.4□□□□□ -0.1
TRAF3IP2O43734 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAF3IP2O43734 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAF3IP2O43734 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms