Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.78□□□□□ -0.04
RNF13O43567 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RNF13O43567 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.78□□□□□ -0.04
RNF13O43567 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RNF13O43567 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
RNF13O43567 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.77□□□□□ -0.04
RNF13O43567 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF13O43567 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.77□□□□□ -0.04
RNF13O43567 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.77□□□□□ -0.04
RNF13O43567 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF13O43567 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF13O43567 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.77□□□□□ -0.04
RNF13O43567 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF13O43567 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF13O43567 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC14.77□□□□□ -0.04
RNF13O43567 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.77□□□□□ -0.04
RNF13O43567 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RNF13O43567 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.77□□□□□ -0.04
RNF13O43567 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
RNF13O43567 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.77□□□□□ -0.04
RNF13O43567 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF13O43567 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF13O43567 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.77□□□□□ -0.05
RNF13O43567 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
RNF13O43567 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF13O43567 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.77□□□□□ -0.05
RNF13O43567 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.05
RNF13O43567 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC14.77□□□□□ -0.05
RNF13O43567 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC14.77□□□□□ -0.05
RNF13O43567 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 AC109635.5-201ENST00000533593 962 ntBASIC14.77□□□□□ -0.05
RNF13O43567 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC14.77□□□□□ -0.05
RNF13O43567 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.77□□□□□ -0.05
RNF13O43567 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF13O43567 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.77□□□□□ -0.05
RNF13O43567 AC120114.3-201ENST00000611923 658 ntBASIC14.77□□□□□ -0.05
RNF13O43567 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.77□□□□□ -0.05
RNF13O43567 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.77□□□□□ -0.05
RNF13O43567 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF13O43567 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF13O43567 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF13O43567 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF13O43567 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.77□□□□□ -0.05
RNF13O43567 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
RNF13O43567 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RNF13O43567 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 U82695.1-201ENST00000635752 1889 ntBASIC14.76□□□□□ -0.05
RNF13O43567 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RNF13O43567 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
RNF13O43567 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
RNF13O43567 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF13O43567 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
RNF13O43567 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 VMO1-203ENST00000416307 712 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF13O43567 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF13O43567 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC14.76□□□□□ -0.05
RNF13O43567 KRT18P34-201ENST00000488218 1270 ntBASIC14.76□□□□□ -0.05
RNF13O43567 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF13O43567 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC14.76□□□□□ -0.05
RNF13O43567 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.76□□□□□ -0.05
RNF13O43567 KRT19P2-202ENST00000557173 1012 ntBASIC14.76□□□□□ -0.05
RNF13O43567 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF13O43567 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF13O43567 BX640515.1-201ENST00000617215 977 ntBASIC14.76□□□□□ -0.05
RNF13O43567 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.76□□□□□ -0.05
RNF13O43567 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
RNF13O43567 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.76□□□□□ -0.05
RNF13O43567 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
RNF13O43567 MIR600HG-201ENST00000449175 5984 ntBASIC14.76□□□□□ -0.05
RNF13O43567 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
RNF13O43567 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms