Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 BX005266.1-201ENST00000473402 457 ntBASIC11.12□□□□□ -0.63
NDUFA1O15239 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.12□□□□□ -0.63
NDUFA1O15239 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC11.12□□□□□ -0.63
NDUFA1O15239 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.12□□□□□ -0.63
NDUFA1O15239 NPAP1P7-201ENST00000613027 823 ntBASIC11.12□□□□□ -0.63
NDUFA1O15239 PGM5P2-202ENST00000637225 1043 ntBASIC11.12□□□□□ -0.63
NDUFA1O15239 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
NDUFA1O15239 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
NDUFA1O15239 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.12□□□□□ -0.63
NDUFA1O15239 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC11.12□□□□□ -0.63
NDUFA1O15239 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
NDUFA1O15239 LINC01101-201ENST00000622953 1884 ntBASIC11.12□□□□□ -0.63
NDUFA1O15239 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.12□□□□□ -0.63
NDUFA1O15239 PC-214ENST00000628663 1470 ntTSL 5 BASIC11.12□□□□□ -0.63
NDUFA1O15239 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
NDUFA1O15239 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
NDUFA1O15239 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.11□□□□□ -0.63
NDUFA1O15239 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC11.11□□□□□ -0.63
NDUFA1O15239 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.11□□□□□ -0.63
NDUFA1O15239 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC11.11□□□□□ -0.63
NDUFA1O15239 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC11.11□□□□□ -0.63
NDUFA1O15239 AC010654.1-201ENST00000615722 808 ntBASIC11.11□□□□□ -0.63
NDUFA1O15239 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
NDUFA1O15239 AL589182.2-201ENST00000619332 1049 ntBASIC11.11□□□□□ -0.63
NDUFA1O15239 AL358472.4-201ENST00000633140 710 ntBASIC11.11□□□□□ -0.63
NDUFA1O15239 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.11□□□□□ -0.63
NDUFA1O15239 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.11□□□□□ -0.63
NDUFA1O15239 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.11□□□□□ -0.63
NDUFA1O15239 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC11.11□□□□□ -0.63
NDUFA1O15239 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC11.11□□□□□ -0.63
NDUFA1O15239 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC11.11□□□□□ -0.63
NDUFA1O15239 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.11□□□□□ -0.63
NDUFA1O15239 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC11.11□□□□□ -0.63
NDUFA1O15239 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC11.11□□□□□ -0.63
NDUFA1O15239 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC11.11□□□□□ -0.63
NDUFA1O15239 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
NDUFA1O15239 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC11.1□□□□□ -0.63
NDUFA1O15239 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC11.1□□□□□ -0.63
NDUFA1O15239 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.1□□□□□ -0.63
NDUFA1O15239 AC087481.3-201ENST00000602886 1894 ntBASIC11.1□□□□□ -0.63
NDUFA1O15239 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
NDUFA1O15239 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC11.1□□□□□ -0.63
NDUFA1O15239 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC11.1□□□□□ -0.63
NDUFA1O15239 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
NDUFA1O15239 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
NDUFA1O15239 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms