Protein–RNA interactions for Protein: O14727

APAF1, Apoptotic protease-activating factor 1, humanhuman

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1O14727 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC21.21■□□□□ 0.99
APAF1O14727 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
APAF1O14727 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
APAF1O14727 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
APAF1O14727 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
APAF1O14727 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
APAF1O14727 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
APAF1O14727 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
APAF1O14727 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC21.2■□□□□ 0.98
APAF1O14727 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
APAF1O14727 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
APAF1O14727 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC21.2■□□□□ 0.98
APAF1O14727 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
APAF1O14727 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
APAF1O14727 AC011477.6-201ENST00000604980 1927 ntBASIC21.2■□□□□ 0.98
APAF1O14727 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.2■□□□□ 0.98
APAF1O14727 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
APAF1O14727 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
APAF1O14727 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC21.2■□□□□ 0.98
APAF1O14727 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
APAF1O14727 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC21.2■□□□□ 0.98
APAF1O14727 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC21.2■□□□□ 0.98
APAF1O14727 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC21.2■□□□□ 0.98
APAF1O14727 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC21.2■□□□□ 0.98
APAF1O14727 AC026979.3-201ENST00000607315 403 ntBASIC21.2■□□□□ 0.98
APAF1O14727 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
APAF1O14727 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC21.2■□□□□ 0.98
APAF1O14727 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
APAF1O14727 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
APAF1O14727 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC21.2■□□□□ 0.98
APAF1O14727 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
APAF1O14727 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
APAF1O14727 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC21.2■□□□□ 0.98
APAF1O14727 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC21.2■□□□□ 0.98
APAF1O14727 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC21.19■□□□□ 0.98
APAF1O14727 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
APAF1O14727 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
APAF1O14727 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC21.19■□□□□ 0.98
APAF1O14727 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
APAF1O14727 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC21.19■□□□□ 0.98
APAF1O14727 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.19■□□□□ 0.98
APAF1O14727 CNN2P2-201ENST00000443536 909 ntBASIC21.19■□□□□ 0.98
APAF1O14727 CNN2P3-201ENST00000450201 906 ntBASIC21.19■□□□□ 0.98
APAF1O14727 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
APAF1O14727 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.19■□□□□ 0.98
APAF1O14727 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC21.19■□□□□ 0.98
APAF1O14727 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC21.19■□□□□ 0.98
APAF1O14727 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 AL136317.3-201ENST00000618497 906 ntBASIC21.19■□□□□ 0.98
APAF1O14727 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
APAF1O14727 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
APAF1O14727 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
APAF1O14727 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC21.19■□□□□ 0.98
APAF1O14727 AL035456.1-201ENST00000456064 1369 ntBASIC21.19■□□□□ 0.98
APAF1O14727 AP005117.1-202ENST00000581724 1908 ntBASIC21.19■□□□□ 0.98
APAF1O14727 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC21.19■□□□□ 0.98
APAF1O14727 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
APAF1O14727 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC21.18■□□□□ 0.98
APAF1O14727 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC21.18■□□□□ 0.98
APAF1O14727 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
APAF1O14727 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APAF1O14727 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
APAF1O14727 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APAF1O14727 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APAF1O14727 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APAF1O14727 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
APAF1O14727 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APAF1O14727 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APAF1O14727 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC21.18■□□□□ 0.98
APAF1O14727 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.18■□□□□ 0.98
APAF1O14727 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC21.18■□□□□ 0.98
APAF1O14727 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
APAF1O14727 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.18■□□□□ 0.98
APAF1O14727 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
APAF1O14727 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APAF1O14727 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC21.18■□□□□ 0.98
APAF1O14727 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
APAF1O14727 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC21.18■□□□□ 0.98
APAF1O14727 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC21.18■□□□□ 0.98
APAF1O14727 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
APAF1O14727 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APAF1O14727 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
APAF1O14727 REXO1L1P-202ENST00000608646 1974 ntBASIC21.17■□□□□ 0.98
APAF1O14727 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
APAF1O14727 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms