Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CHD1O14646 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
CHD1O14646 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHD1O14646 IDS-203ENST00000428056 1213 ntTSL 2 BASIC25.42■■□□□ 1.66
CHD1O14646 AL139008.1-201ENST00000437894 228 ntBASIC25.42■■□□□ 1.66
CHD1O14646 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC25.42■■□□□ 1.66
CHD1O14646 AC087045.2-201ENST00000606279 1003 ntBASIC25.42■■□□□ 1.66
CHD1O14646 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC25.42■■□□□ 1.66
CHD1O14646 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC25.42■■□□□ 1.66
CHD1O14646 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC25.41■■□□□ 1.66
CHD1O14646 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CHD1O14646 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHD1O14646 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CHD1O14646 RNMTL1P1-201ENST00000454103 560 ntBASIC25.41■■□□□ 1.66
CHD1O14646 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CHD1O14646 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CHD1O14646 RBM8B-201ENST00000555532 525 ntBASIC25.41■■□□□ 1.66
CHD1O14646 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
CHD1O14646 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC25.41■■□□□ 1.66
CHD1O14646 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC25.41■■□□□ 1.66
CHD1O14646 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC25.41■■□□□ 1.66
CHD1O14646 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
CHD1O14646 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
CHD1O14646 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC25.41■■□□□ 1.66
CHD1O14646 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC25.41■■□□□ 1.66
CHD1O14646 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC25.41■■□□□ 1.66
CHD1O14646 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC25.41■■□□□ 1.66
CHD1O14646 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC25.41■■□□□ 1.66
CHD1O14646 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC25.41■■□□□ 1.66
CHD1O14646 CD276-201ENST00000318424 2738 ntTSL 5 BASIC25.4■■□□□ 1.66
CHD1O14646 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC25.4■■□□□ 1.66
CHD1O14646 RTN3P1-201ENST00000536295 711 ntBASIC25.4■■□□□ 1.66
CHD1O14646 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC25.4■■□□□ 1.66
CHD1O14646 BNIP3P13-201ENST00000599968 566 ntBASIC25.4■■□□□ 1.66
CHD1O14646 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC25.4■■□□□ 1.66
CHD1O14646 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CHD1O14646 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC25.4■■□□□ 1.66
CHD1O14646 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHD1O14646 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHD1O14646 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC25.4■■□□□ 1.66
CHD1O14646 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC25.4■■□□□ 1.66
CHD1O14646 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CHD1O14646 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHD1O14646 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC25.4■■□□□ 1.66
CHD1O14646 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
CHD1O14646 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
CHD1O14646 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CHD1O14646 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC25.4■■□□□ 1.66
CHD1O14646 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC25.4■■□□□ 1.66
CHD1O14646 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC25.4■■□□□ 1.66
CHD1O14646 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC25.4■■□□□ 1.66
CHD1O14646 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHD1O14646 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
CHD1O14646 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC25.4■■□□□ 1.66
CHD1O14646 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHD1O14646 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHD1O14646 AC007787.1-201ENST00000588095 1583 ntBASIC25.39■■□□□ 1.66
CHD1O14646 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHD1O14646 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC25.39■■□□□ 1.66
CHD1O14646 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
CHD1O14646 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC25.39■■□□□ 1.66
CHD1O14646 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC25.39■■□□□ 1.66
CHD1O14646 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC25.39■■□□□ 1.66
CHD1O14646 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
CHD1O14646 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC25.39■■□□□ 1.66
CHD1O14646 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC25.39■■□□□ 1.65
CHD1O14646 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC25.39■■□□□ 1.65
CHD1O14646 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC25.39■■□□□ 1.65
CHD1O14646 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC25.39■■□□□ 1.65
CHD1O14646 AC009084.3-201ENST00000623356 437 ntBASIC25.39■■□□□ 1.65
CHD1O14646 AC006453.1-201ENST00000636037 1257 ntBASIC25.39■■□□□ 1.65
CHD1O14646 PRSS30P-206ENST00000641773 873 ntBASIC25.39■■□□□ 1.65
CHD1O14646 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC25.39■■□□□ 1.65
CHD1O14646 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
CHD1O14646 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD1O14646 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC25.38■■□□□ 1.65
CHD1O14646 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD1O14646 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
CHD1O14646 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC25.38■■□□□ 1.65
CHD1O14646 SUN1-204ENST00000403868 978 ntTSL 2 BASIC25.38■■□□□ 1.65
CHD1O14646 ISCA2P1-201ENST00000425548 448 ntBASIC25.38■■□□□ 1.65
CHD1O14646 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC25.38■■□□□ 1.65
CHD1O14646 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC25.38■■□□□ 1.65
CHD1O14646 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD1O14646 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD1O14646 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC25.38■■□□□ 1.65
CHD1O14646 GMFG-209ENST00000600322 622 ntTSL 5 BASIC25.38■■□□□ 1.65
CHD1O14646 OR10B1P-201ENST00000601666 907 ntBASIC25.38■■□□□ 1.65
CHD1O14646 AC092171.5-201ENST00000608012 942 ntBASIC25.38■■□□□ 1.65
CHD1O14646 AC068587.8-201ENST00000641239 219 ntBASIC25.38■■□□□ 1.65
CHD1O14646 AC134407.2-201ENST00000625089 1978 ntBASIC25.38■■□□□ 1.65
CHD1O14646 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD1O14646 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
CHD1O14646 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD1O14646 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC25.38■■□□□ 1.65
CHD1O14646 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD1O14646 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD1O14646 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC25.38■■□□□ 1.65
CHD1O14646 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
CHD1O14646 PCDHB18P-201ENST00000524813 2368 ntBASIC25.38■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms