Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC27.05■■□□□ 1.92
CUX2O14529 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CUX2O14529 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC27.05■■□□□ 1.92
CUX2O14529 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC27.05■■□□□ 1.92
CUX2O14529 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CUX2O14529 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
CUX2O14529 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CUX2O14529 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC27.05■■□□□ 1.92
CUX2O14529 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CUX2O14529 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
CUX2O14529 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CUX2O14529 AL391256.1-201ENST00000443260 1855 ntBASIC27.04■■□□□ 1.92
CUX2O14529 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC27.04■■□□□ 1.92
CUX2O14529 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CUX2O14529 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC27.04■■□□□ 1.92
CUX2O14529 NDUFAB1P1-201ENST00000404262 460 ntBASIC27.04■■□□□ 1.92
CUX2O14529 RPL18P13-201ENST00000478088 569 ntBASIC27.04■■□□□ 1.92
CUX2O14529 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC27.04■■□□□ 1.92
CUX2O14529 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC27.04■■□□□ 1.92
CUX2O14529 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
CUX2O14529 AC006453.1-201ENST00000636037 1257 ntBASIC27.04■■□□□ 1.92
CUX2O14529 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
CUX2O14529 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC27.04■■□□□ 1.92
CUX2O14529 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC27.04■■□□□ 1.92
CUX2O14529 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CUX2O14529 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CUX2O14529 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CUX2O14529 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC27.03■■□□□ 1.92
CUX2O14529 EHMT2-AS1-201ENST00000434689 373 ntTSL 3 BASIC27.03■■□□□ 1.92
CUX2O14529 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC27.03■■□□□ 1.92
CUX2O14529 TNNT2-214ENST00000458432 1182 ntAPPRIS ALT2 TSL 5 BASIC27.03■■□□□ 1.92
CUX2O14529 AC013355.1-201ENST00000562625 723 ntBASIC27.03■■□□□ 1.92
CUX2O14529 DNM1P30-201ENST00000563586 452 ntBASIC27.03■■□□□ 1.92
CUX2O14529 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC27.03■■□□□ 1.92
CUX2O14529 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CUX2O14529 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
CUX2O14529 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC27.03■■□□□ 1.92
CUX2O14529 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC27.03■■□□□ 1.92
CUX2O14529 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
CUX2O14529 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CUX2O14529 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
CUX2O14529 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC27.02■■□□□ 1.92
CUX2O14529 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CUX2O14529 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CUX2O14529 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CUX2O14529 STX6-204ENST00000542060 4809 ntTSL 2 BASIC27.02■■□□□ 1.92
CUX2O14529 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CUX2O14529 LINC01433-201ENST00000419003 697 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CUX2O14529 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC27.02■■□□□ 1.92
CUX2O14529 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
CUX2O14529 AC000095.1-201ENST00000603208 874 ntBASIC27.02■■□□□ 1.92
CUX2O14529 CDK7-214ENST00000626796 358 ntTSL 5 BASIC27.02■■□□□ 1.92
CUX2O14529 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC27.02■■□□□ 1.92
CUX2O14529 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CUX2O14529 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
CUX2O14529 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CUX2O14529 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CUX2O14529 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CUX2O14529 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC27.02■■□□□ 1.92
CUX2O14529 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC27.02■■□□□ 1.92
CUX2O14529 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CUX2O14529 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC27.02■■□□□ 1.92
CUX2O14529 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC27.02■■□□□ 1.92
CUX2O14529 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC27.02■■□□□ 1.92
CUX2O14529 AL645728.1-201ENST00000366221 2101 ntBASIC27.02■■□□□ 1.92
CUX2O14529 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CUX2O14529 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
CUX2O14529 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
CUX2O14529 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CUX2O14529 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
CUX2O14529 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC27.01■■□□□ 1.91
CUX2O14529 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC27.01■■□□□ 1.91
CUX2O14529 AC106794.1-201ENST00000506935 792 ntBASIC27.01■■□□□ 1.91
CUX2O14529 ALG1L13P-202ENST00000519320 584 ntBASIC27.01■■□□□ 1.91
CUX2O14529 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC27.01■■□□□ 1.91
CUX2O14529 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC27.01■■□□□ 1.91
CUX2O14529 AC005730.2-201ENST00000564549 1184 ntBASIC27.01■■□□□ 1.91
CUX2O14529 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC27.01■■□□□ 1.91
CUX2O14529 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC27.01■■□□□ 1.91
CUX2O14529 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC27.01■■□□□ 1.91
CUX2O14529 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC27.01■■□□□ 1.91
CUX2O14529 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC27.01■■□□□ 1.91
CUX2O14529 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC27.01■■□□□ 1.91
CUX2O14529 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CUX2O14529 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
CUX2O14529 NOC2LP2-201ENST00000407594 1944 ntBASIC27.01■■□□□ 1.91
CUX2O14529 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC27■■□□□ 1.91
CUX2O14529 AC026410.3-201ENST00000514280 936 ntBASIC27■■□□□ 1.91
CUX2O14529 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC27■■□□□ 1.91
CUX2O14529 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC27■■□□□ 1.91
CUX2O14529 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC27■■□□□ 1.91
CUX2O14529 AC015910.1-201ENST00000579400 975 ntBASIC27■■□□□ 1.91
CUX2O14529 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC27■■□□□ 1.91
CUX2O14529 AC244157.2-201ENST00000616239 1006 ntBASIC27■■□□□ 1.91
CUX2O14529 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC27■■□□□ 1.91
CUX2O14529 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC27■■□□□ 1.91
CUX2O14529 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC27■■□□□ 1.91
CUX2O14529 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC27■■□□□ 1.91
CUX2O14529 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CUX2O14529 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms