Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 HLA-H-201ENST00000383620 1096 ntBASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 GOLGA6L11P-201ENST00000417252 1298 ntBASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 HLA-V-204ENST00000476601 1289 ntBASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 AL138918.1-201ENST00000568306 659 ntBASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 MIR4492-201ENST00000581627 80 ntBASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 AL590560.3-201ENST00000623350 461 ntBASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 TUBB8P12-201ENST00000308911 1335 ntBASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 TUBB7P-202ENST00000428444 1305 ntBASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 TUBB8P7-204ENST00000567960 1332 ntBASIC15.92■□□□□ 0.14
TMX2-CTNND1H3BSU7 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 FES-204ENST00000414248 2327 ntTSL 2 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 AL353705.2-201ENST00000428243 662 ntBASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 CRB3P1-201ENST00000449338 276 ntBASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 PRYP6-201ENST00000514804 343 ntBASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 AC100757.3-201ENST00000622361 1406 ntBASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 AL365203.3-201ENST00000609742 2057 ntBASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC15.91■□□□□ 0.14
TMX2-CTNND1H3BSU7 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 GK-202ENST00000378941 458 ntTSL 3 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 MIR661-201ENST00000384842 89 ntBASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.9■□□□□ 0.14
TMX2-CTNND1H3BSU7 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms