Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TSPY26P-202ENST00000565928 3884 ntBASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AL603832.2-201ENST00000566195 2125 ntBASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.06□□□□□ -0.32
TCRBV4S1A1TA0A5B7 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MIR770-201ENST00000390219 98 ntBASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC011467.4-201ENST00000594891 528 ntBASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SIGLEC29P-201ENST00000599873 1114 ntBASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC068418.2-201ENST00000577309 3703 ntBASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC068587.6-202ENST00000641839 5619 ntBASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC131009.4-201ENST00000624048 1740 ntBASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
TCRBV4S1A1TA0A5B7 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC103702.1-201ENST00000548801 2630 ntBASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PMS2P4-201ENST00000412466 1052 ntBASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC092474.2-201ENST00000424288 719 ntBASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 POU5F1P6-201ENST00000466990 990 ntBASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC109322.1-201ENST00000524499 1264 ntBASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC243562.1-201ENST00000560672 389 ntBASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 MIR4492-201ENST00000581627 80 ntBASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AC093512.1-201ENST00000617969 520 ntBASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
TCRBV4S1A1TA0A5B7 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms