Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 LITAF-211ENST00000572255 516 ntTSL 4 BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 KLK8-205ENST00000593490 267 ntTSL 3 BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 AC004790.2-201ENST00000623588 572 ntBASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 AC007326.2-201ENST00000624224 7579 ntBASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 AC117500.6-201ENST00000624871 588 ntBASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
HHLA3Q9XRX5 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
HHLA3Q9XRX5 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
HHLA3Q9XRX5 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC11.9□□□□□ -0.51
HHLA3Q9XRX5 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
HHLA3Q9XRX5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.51
HHLA3Q9XRX5 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC11.9□□□□□ -0.51
HHLA3Q9XRX5 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 AC006277.1-201ENST00000624348 1610 ntBASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 AC098831.1-202ENST00000438821 336 ntBASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 AC108073.2-201ENST00000464002 357 ntBASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 SLC25A6P2-201ENST00000497974 877 ntBASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 AC091167.2-201ENST00000579581 588 ntBASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 AC005412.3-201ENST00000580309 715 ntBASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 MPDU1-223ENST00000582151 728 ntBASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 AL049840.3-201ENST00000602669 611 ntBASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 AC013467.2-201ENST00000605472 835 ntBASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 REXO1L3P-201ENST00000622202 1288 ntBASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 AC006486.2-201ENST00000624246 2199 ntBASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 HARS-204ENST00000438307 1789 ntTSL 2 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 R3HDM2P2-201ENST00000401880 2116 ntBASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 AL353732.1-201ENST00000569618 1459 ntBASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
HHLA3Q9XRX5 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
HHLA3Q9XRX5 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms