Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 HLA-DQB2-231ENST00000435145 2026 ntBASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 SPDYE7P-202ENST00000420373 878 ntBASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 AL133215.2-201ENST00000609242 977 ntBASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 AL035456.1-201ENST00000456064 1369 ntBASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PCDHGC3Q9UN70 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 REXO1L1P-202ENST00000608646 1974 ntBASIC17■□□□□ 0.31
PCDHGC3Q9UN70 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 SPDYE17-201ENST00000412399 783 ntBASIC17■□□□□ 0.31
PCDHGC3Q9UN70 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 KRT8P37-201ENST00000451609 1420 ntBASIC17■□□□□ 0.31
PCDHGC3Q9UN70 AC069262.1-201ENST00000539058 672 ntBASIC17■□□□□ 0.31
PCDHGC3Q9UN70 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 RN7SL371P-201ENST00000578099 267 ntBASIC17■□□□□ 0.31
PCDHGC3Q9UN70 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 AP001160.2-201ENST00000596071 487 ntBASIC17■□□□□ 0.31
PCDHGC3Q9UN70 AC003101.2-201ENST00000612557 442 ntBASIC17■□□□□ 0.31
PCDHGC3Q9UN70 LINC00628-201ENST00000628516 1289 ntBASIC17■□□□□ 0.31
PCDHGC3Q9UN70 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17■□□□□ 0.31
PCDHGC3Q9UN70 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 AL139400.1-201ENST00000366220 510 ntBASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 AC109322.1-201ENST00000524499 1264 ntBASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 MIR4453-201ENST00000584019 89 ntBASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 RN7SL828P-201ENST00000607615 303 ntBASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 MIR6080-201ENST00000617359 66 ntBASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.99■□□□□ 0.31
PCDHGC3Q9UN70 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms