Protein–RNA interactions for Protein: Q9UBT3

DKK4, Dickkopf-related protein 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK4Q9UBT3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
DKK4Q9UBT3 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 MIR769-201ENST00000390225 118 ntBASIC14.84□□□□□ -0.03
DKK4Q9UBT3 AL133466.1-201ENST00000447582 150 ntBASIC14.84□□□□□ -0.03
DKK4Q9UBT3 AC245100.5-201ENST00000452108 331 ntBASIC14.84□□□□□ -0.03
DKK4Q9UBT3 AC245884.6-201ENST00000515672 1067 ntBASIC14.84□□□□□ -0.03
DKK4Q9UBT3 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 CYGB-203ENST00000589145 788 ntTSL 3 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 KLK3-207ENST00000595952 969 ntTSL 3 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 AC097724.1-201ENST00000609581 426 ntBASIC14.84□□□□□ -0.03
DKK4Q9UBT3 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 AC006453.4-201ENST00000636949 1252 ntBASIC14.84□□□□□ -0.03
DKK4Q9UBT3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC14.84□□□□□ -0.03
DKK4Q9UBT3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
DKK4Q9UBT3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
DKK4Q9UBT3 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
DKK4Q9UBT3 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC14.83□□□□□ -0.03
DKK4Q9UBT3 AC092068.3-201ENST00000587894 2016 ntBASIC14.83□□□□□ -0.03
DKK4Q9UBT3 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
DKK4Q9UBT3 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
DKK4Q9UBT3 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
DKK4Q9UBT3 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 AL391256.1-201ENST00000443260 1855 ntBASIC14.83□□□□□ -0.04
DKK4Q9UBT3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 AC015910.1-201ENST00000579400 975 ntBASIC14.83□□□□□ -0.04
DKK4Q9UBT3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 AP005019.2-201ENST00000615104 511 ntBASIC14.83□□□□□ -0.04
DKK4Q9UBT3 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 GGT4P-201ENST00000623672 1708 ntBASIC14.83□□□□□ -0.04
DKK4Q9UBT3 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DKK4Q9UBT3 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms