Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 AC069262.1-201ENST00000539058 672 ntBASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 RN7SL828P-201ENST00000607615 303 ntBASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 MIR6080-201ENST00000617359 66 ntBASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 AC046158.3-201ENST00000624947 2558 ntBASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
BLOC1S4Q9NUP1 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 AC026979.3-201ENST00000607315 403 ntBASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
BLOC1S4Q9NUP1 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.89■□□□□ 0.46
BLOC1S4Q9NUP1 KRT8P37-201ENST00000451609 1420 ntBASIC17.89■□□□□ 0.46
BLOC1S4Q9NUP1 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
BLOC1S4Q9NUP1 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
BLOC1S4Q9NUP1 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
BLOC1S4Q9NUP1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
BLOC1S4Q9NUP1 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
BLOC1S4Q9NUP1 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 SPDYE17-201ENST00000412399 783 ntBASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 AC079781.4-201ENST00000641908 219 ntBASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
BLOC1S4Q9NUP1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms