Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.74
ECHDC1Q9NTX5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 PON3-203ENST00000427422 894 ntTSL 3 BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 MTND6P24-201ENST00000440466 518 ntBASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
ECHDC1Q9NTX5 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 WRB-204ENST00000398753 699 ntTSL 3 BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 SPDYE17-201ENST00000412399 783 ntBASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 KLF2P3-201ENST00000451977 1087 ntBASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 SATB1-217ENST00000493952 626 ntTSL 3 BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 AC008894.3-201ENST00000624324 3103 ntBASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC19.63■□□□□ 0.73
ECHDC1Q9NTX5 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 EEF1DP4-201ENST00000446006 880 ntBASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
ECHDC1Q9NTX5 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 CROCCP1-201ENST00000426910 5675 ntBASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 KRT8P37-201ENST00000451609 1420 ntBASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 RPS19-201ENST00000221975 500 ntTSL 3 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
ECHDC1Q9NTX5 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms