Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 MIR6765-201ENST00000614092 87 ntBASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 HTR7P1-201ENST00000538670 1336 ntBASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 KIF25-AS1-202ENST00000456585 2795 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 CPNE1-201ENST00000317677 1961 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 NIN-206ENST00000453196 6785 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC8.17□□□□□ -1.1
CDC42SE1Q9NRR8 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 AC012531.1-201ENST00000562848 2680 ntBASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 ZFYVE27-201ENST00000337540 2927 ntTSL 2 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 TRIM35-201ENST00000305364 4229 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 AC068760.1-201ENST00000493579 1953 ntBASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 FAM90A11P-201ENST00000518378 2218 ntBASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 AC092919.2-201ENST00000623631 1645 ntBASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 AC241377.3-202ENST00000626088 1088 ntBASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 AC241585.3-202ENST00000628937 1088 ntBASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 AC245100.8-202ENST00000629247 1058 ntBASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 HADH-212ENST00000638621 741 ntTSL 5 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
CDC42SE1Q9NRR8 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms