Protein–RNA interactions for Protein: Q9NPL8

TIMMDC1, Complex I assembly factor TIMMDC1, mitochondrial, humanhuman

Predictions only

Length 285 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMMDC1Q9NPL8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TIMMDC1Q9NPL8 AC005089.1-201ENST00000619486 2241 ntBASIC15.66■□□□□ 0.1
TIMMDC1Q9NPL8 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 CYB561-216ENST00000582297 897 ntTSL 3 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 AL691403.2-201ENST00000618460 490 ntBASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 AC079781.4-201ENST00000641908 219 ntBASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TIMMDC1Q9NPL8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
TIMMDC1Q9NPL8 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 SERPINA7P1-201ENST00000443077 631 ntBASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 FAM185BP-201ENST00000443595 716 ntBASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 PDPK2P-202ENST00000562415 1191 ntBASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 AC005829.1-201ENST00000570002 483 ntBASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 AL513190.1-201ENST00000621254 727 ntBASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 AC092053.1-201ENST00000605787 1936 ntBASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.64■□□□□ 0.09
TIMMDC1Q9NPL8 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
TIMMDC1Q9NPL8 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
TIMMDC1Q9NPL8 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TIMMDC1Q9NPL8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.63■□□□□ 0.09
TIMMDC1Q9NPL8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TIMMDC1Q9NPL8 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms