Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AL596257.1-201ENST00000641463 2694 ntBASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 PGAM5P1-201ENST00000518923 814 ntBASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 INO80E-210ENST00000567705 880 ntTSL 3 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 AC027307.2-201ENST00000591252 911 ntBASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 SPTSSB-204ENST00000617024 1292 ntBASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
LRRC40Q9H9A6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 AP001282.1-201ENST00000531301 1499 ntBASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 YBX2P1-201ENST00000394192 760 ntBASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 AC004832.2-201ENST00000426397 482 ntBASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 ADH5P3-201ENST00000433842 1137 ntBASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 ACTG1P14-201ENST00000446382 1122 ntBASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 POLD2P1-201ENST00000511220 997 ntBASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 AC024267.1-201ENST00000582320 895 ntBASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
LRRC40Q9H9A6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC16.42■□□□□ 0.22
LRRC40Q9H9A6 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms