Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 GGT3P-204ENST00000453783 1664 ntBASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 UNC93B6-202ENST00000528242 690 ntBASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 AL662844.1-201ENST00000546340 181 ntBASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 ACTL9-202ENST00000612068 1252 ntBASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 WT1-AS_2.1-201ENST00000613208 137 ntBASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 AP001350.2-201ENST00000625104 1094 ntBASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.94□□□□□ -0.34
CHRDL1Q9BU40 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 GGT4P-201ENST00000623672 1708 ntBASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 HLA-A-201ENST00000376802 1334 ntBASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 HCG4-201ENST00000418983 998 ntBASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 CDK2AP2P3-201ENST00000422476 372 ntBASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 PRSS29P-201ENST00000440800 595 ntBASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 FAM185BP-201ENST00000443595 716 ntBASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 AC009947.1-201ENST00000444350 727 ntBASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CHRDL1Q9BU40 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms