Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 MME-217ENST00000616757 1315 ntTSL 5 BASIC10.78□□□□□ -0.68
LITAFQ99732 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC10.78□□□□□ -0.68
LITAFQ99732 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 HSPA7-201ENST00000445535 1927 ntBASIC10.78□□□□□ -0.68
LITAFQ99732 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
LITAFQ99732 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
LITAFQ99732 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
LITAFQ99732 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC10.77□□□□□ -0.68
LITAFQ99732 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC10.77□□□□□ -0.68
LITAFQ99732 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LITAFQ99732 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.68
LITAFQ99732 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
LITAFQ99732 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
LITAFQ99732 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
LITAFQ99732 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC10.77□□□□□ -0.68
LITAFQ99732 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC10.77□□□□□ -0.68
LITAFQ99732 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
LITAFQ99732 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
LITAFQ99732 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC10.77□□□□□ -0.68
LITAFQ99732 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC10.77□□□□□ -0.68
LITAFQ99732 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
LITAFQ99732 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
LITAFQ99732 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC10.77□□□□□ -0.69
LITAFQ99732 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC10.77□□□□□ -0.69
LITAFQ99732 STK33-217ENST00000534493 1895 ntTSL 2 BASIC10.77□□□□□ -0.69
LITAFQ99732 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC10.77□□□□□ -0.69
LITAFQ99732 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC10.77□□□□□ -0.69
LITAFQ99732 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
LITAFQ99732 MMP23A-201ENST00000234610 1017 ntBASIC10.77□□□□□ -0.69
LITAFQ99732 ARMC10P1-201ENST00000313754 855 ntBASIC10.77□□□□□ -0.69
LITAFQ99732 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
LITAFQ99732 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 AC246785.2-201ENST00000432512 513 ntBASIC10.77□□□□□ -0.69
LITAFQ99732 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 COX11P1-201ENST00000489116 835 ntBASIC10.77□□□□□ -0.69
LITAFQ99732 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
LITAFQ99732 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC10.77□□□□□ -0.69
LITAFQ99732 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC10.77□□□□□ -0.69
LITAFQ99732 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC10.77□□□□□ -0.69
LITAFQ99732 CYB561-217ENST00000582997 877 ntTSL 5 BASIC10.77□□□□□ -0.69
LITAFQ99732 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC10.77□□□□□ -0.69
LITAFQ99732 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC10.77□□□□□ -0.69
LITAFQ99732 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
LITAFQ99732 AC073592.4-201ENST00000623827 446 ntBASIC10.77□□□□□ -0.69
LITAFQ99732 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 ZBED1P1-201ENST00000502364 1930 ntBASIC10.77□□□□□ -0.69
LITAFQ99732 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
LITAFQ99732 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
LITAFQ99732 ILF3-AS1-201ENST00000591501 1983 ntBASIC10.77□□□□□ -0.69
LITAFQ99732 REXO1L1P-202ENST00000608646 1974 ntBASIC10.77□□□□□ -0.69
LITAFQ99732 AL928921.2-201ENST00000641325 2442 ntBASIC10.77□□□□□ -0.69
LITAFQ99732 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC10.77□□□□□ -0.69
LITAFQ99732 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
LITAFQ99732 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC10.77□□□□□ -0.69
LITAFQ99732 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC10.77□□□□□ -0.69
LITAFQ99732 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC10.77□□□□□ -0.69
LITAFQ99732 AC027601.5-201ENST00000624065 2482 ntBASIC10.77□□□□□ -0.69
LITAFQ99732 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
LITAFQ99732 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
LITAFQ99732 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 LINC01230-201ENST00000625222 3017 ntBASIC10.76□□□□□ -0.69
LITAFQ99732 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC10.76□□□□□ -0.69
LITAFQ99732 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC10.76□□□□□ -0.69
LITAFQ99732 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
LITAFQ99732 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
LITAFQ99732 LGALS8-AS1-201ENST00000487567 1457 ntBASIC10.76□□□□□ -0.69
LITAFQ99732 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
LITAFQ99732 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms