Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
SNX18Q96RF0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.83□□□□□ -0.04
SNX18Q96RF0 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNX18Q96RF0 CYP51A1P2-201ENST00000419457 1499 ntBASIC14.82□□□□□ -0.04
SNX18Q96RF0 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNX18Q96RF0 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNX18Q96RF0 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNX18Q96RF0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNX18Q96RF0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNX18Q96RF0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNX18Q96RF0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNX18Q96RF0 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNX18Q96RF0 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNX18Q96RF0 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 KRT18P13-201ENST00000400056 1290 ntBASIC14.82□□□□□ -0.04
SNX18Q96RF0 MRPL20P1-201ENST00000400819 433 ntBASIC14.82□□□□□ -0.04
SNX18Q96RF0 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.82□□□□□ -0.04
SNX18Q96RF0 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNX18Q96RF0 AC092910.1-201ENST00000482027 1129 ntBASIC14.82□□□□□ -0.04
SNX18Q96RF0 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 AL356488.2-201ENST00000602755 427 ntBASIC14.82□□□□□ -0.04
SNX18Q96RF0 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNX18Q96RF0 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
SNX18Q96RF0 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNX18Q96RF0 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
SNX18Q96RF0 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 SLC9A3P2-201ENST00000447821 2021 ntBASIC14.82□□□□□ -0.04
SNX18Q96RF0 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
SNX18Q96RF0 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 AC005089.1-201ENST00000619486 2241 ntBASIC14.81□□□□□ -0.04
SNX18Q96RF0 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 AC006449.6-201ENST00000612330 2296 ntBASIC14.81□□□□□ -0.04
SNX18Q96RF0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 AC092865.5-201ENST00000545435 363 ntBASIC14.81□□□□□ -0.04
SNX18Q96RF0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 MIR3909-201ENST00000579518 119 ntBASIC14.81□□□□□ -0.04
SNX18Q96RF0 AC005593.1-201ENST00000624894 515 ntBASIC14.81□□□□□ -0.04
SNX18Q96RF0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
SNX18Q96RF0 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SNX18Q96RF0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SNX18Q96RF0 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
SNX18Q96RF0 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms