Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 GPX1P2-201ENST00000429271 606 ntBASIC17.12■□□□□ 0.33
TRIM11Q96F44 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 AL121894.2-201ENST00000602977 491 ntBASIC17.12■□□□□ 0.33
TRIM11Q96F44 SPTSSB-204ENST00000617024 1292 ntBASIC17.12■□□□□ 0.33
TRIM11Q96F44 AC091812.2-201ENST00000619081 385 ntBASIC17.12■□□□□ 0.33
TRIM11Q96F44 AC008267.7-201ENST00000624570 1194 ntBASIC17.12■□□□□ 0.33
TRIM11Q96F44 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM11Q96F44 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM11Q96F44 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 AL671277.1-201ENST00000429656 993 ntBASIC17.11■□□□□ 0.33
TRIM11Q96F44 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 AL135744.1-201ENST00000565098 629 ntBASIC17.11■□□□□ 0.33
TRIM11Q96F44 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRIM11Q96F44 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRIM11Q96F44 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 TFAMP1-201ENST00000412727 736 ntBASIC17.1■□□□□ 0.33
TRIM11Q96F44 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRIM11Q96F44 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.1■□□□□ 0.33
TRIM11Q96F44 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms