Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIFAQ96CG3 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIFAQ96CG3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIFAQ96CG3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIFAQ96CG3 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIFAQ96CG3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TIFAQ96CG3 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIFAQ96CG3 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.14■□□□□ 0.33
TIFAQ96CG3 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.14■□□□□ 0.33
TIFAQ96CG3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TIFAQ96CG3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TIFAQ96CG3 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
TIFAQ96CG3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TIFAQ96CG3 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.14■□□□□ 0.33
TIFAQ96CG3 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TIFAQ96CG3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 CROCCP2-202ENST00000412962 2773 ntBASIC17.13■□□□□ 0.33
TIFAQ96CG3 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TIFAQ96CG3 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TIFAQ96CG3 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC17.13■□□□□ 0.33
TIFAQ96CG3 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC17.13■□□□□ 0.33
TIFAQ96CG3 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.13■□□□□ 0.33
TIFAQ96CG3 AC004898.1-201ENST00000451057 766 ntBASIC17.13■□□□□ 0.33
TIFAQ96CG3 AL591846.1-201ENST00000451736 433 ntBASIC17.13■□□□□ 0.33
TIFAQ96CG3 AHRR-211ENST00000515206 462 ntTSL 5 BASIC17.13■□□□□ 0.33
TIFAQ96CG3 AC124947.2-201ENST00000547118 1133 ntBASIC17.13■□□□□ 0.33
TIFAQ96CG3 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.13■□□□□ 0.33
TIFAQ96CG3 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.13■□□□□ 0.33
TIFAQ96CG3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.13■□□□□ 0.33
TIFAQ96CG3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TIFAQ96CG3 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TIFAQ96CG3 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TIFAQ96CG3 USE1-206ENST00000595101 1776 ntTSL 2 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 BX284668.4-201ENST00000453917 508 ntBASIC17.12■□□□□ 0.33
TIFAQ96CG3 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 AC005695.3-201ENST00000614522 232 ntBASIC17.12■□□□□ 0.33
TIFAQ96CG3 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 AC128714.1-201ENST00000637035 887 ntBASIC17.12■□□□□ 0.33
TIFAQ96CG3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.12■□□□□ 0.33
TIFAQ96CG3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TIFAQ96CG3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIFAQ96CG3 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TIFAQ96CG3 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TIFAQ96CG3 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.11■□□□□ 0.33
TIFAQ96CG3 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIFAQ96CG3 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
TIFAQ96CG3 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 82.2 ms