Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A3Q93084 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.08■□□□□ 0.32
ATP2A3Q93084 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.08■□□□□ 0.32
ATP2A3Q93084 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC17.08■□□□□ 0.32
ATP2A3Q93084 RN7SL204P-201ENST00000582831 262 ntBASIC17.08■□□□□ 0.32
ATP2A3Q93084 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.08■□□□□ 0.32
ATP2A3Q93084 YTHDF3-AS1-201ENST00000603538 718 ntBASIC17.08■□□□□ 0.32
ATP2A3Q93084 AC013467.2-201ENST00000605472 835 ntBASIC17.08■□□□□ 0.32
ATP2A3Q93084 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A3Q93084 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.08■□□□□ 0.32
ATP2A3Q93084 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP2A3Q93084 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.08■□□□□ 0.32
ATP2A3Q93084 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
ATP2A3Q93084 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 AP3S2-216ENST00000617003 1561 ntBASIC17.07■□□□□ 0.32
ATP2A3Q93084 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 AC092580.3-201ENST00000430932 139 ntBASIC17.07■□□□□ 0.32
ATP2A3Q93084 AC241585.1-201ENST00000433527 519 ntBASIC17.07■□□□□ 0.32
ATP2A3Q93084 UGT1A2P-201ENST00000454886 866 ntBASIC17.07■□□□□ 0.32
ATP2A3Q93084 CFL1-212ENST00000531413 636 ntTSL 3 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 AC239800.4-201ENST00000603712 296 ntBASIC17.07■□□□□ 0.32
ATP2A3Q93084 AC003101.2-201ENST00000612557 442 ntBASIC17.07■□□□□ 0.32
ATP2A3Q93084 AC007967.4-201ENST00000614700 386 ntBASIC17.07■□□□□ 0.32
ATP2A3Q93084 AC073592.8-201ENST00000624126 511 ntBASIC17.07■□□□□ 0.32
ATP2A3Q93084 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 AC026691.1-201ENST00000602502 2017 ntBASIC17.07■□□□□ 0.32
ATP2A3Q93084 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
ATP2A3Q93084 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
ATP2A3Q93084 AC006277.1-201ENST00000624348 1610 ntBASIC17.07■□□□□ 0.32
ATP2A3Q93084 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 HLA-H-201ENST00000383620 1096 ntBASIC17.06■□□□□ 0.32
ATP2A3Q93084 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
ATP2A3Q93084 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
ATP2A3Q93084 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms