Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 AP001282.1-201ENST00000531301 1499 ntBASIC17.37■□□□□ 0.37
SEMA4DQ92854 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SEMA4DQ92854 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA4DQ92854 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA4DQ92854 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA4DQ92854 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA4DQ92854 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 ABR-203ENST00000536794 2213 ntTSL 2 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA4DQ92854 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA4DQ92854 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 AP001059.3-201ENST00000619053 235 ntBASIC17.36■□□□□ 0.37
SEMA4DQ92854 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA4DQ92854 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.36■□□□□ 0.37
SEMA4DQ92854 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SEMA4DQ92854 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SEMA4DQ92854 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC17.35■□□□□ 0.37
SEMA4DQ92854 AC018892.3-201ENST00000623986 2499 ntBASIC17.35■□□□□ 0.37
SEMA4DQ92854 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC17.35■□□□□ 0.37
SEMA4DQ92854 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC17.35■□□□□ 0.37
SEMA4DQ92854 HLA-J-203ENST00000494367 1087 ntBASIC17.35■□□□□ 0.37
SEMA4DQ92854 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SEMA4DQ92854 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.35■□□□□ 0.37
SEMA4DQ92854 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SEMA4DQ92854 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 MIR4453-201ENST00000584019 89 ntBASIC17.35■□□□□ 0.37
SEMA4DQ92854 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.35■□□□□ 0.37
SEMA4DQ92854 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.35■□□□□ 0.37
SEMA4DQ92854 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.35■□□□□ 0.37
SEMA4DQ92854 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC17.35■□□□□ 0.37
SEMA4DQ92854 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
SEMA4DQ92854 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC17.35■□□□□ 0.37
SEMA4DQ92854 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.35■□□□□ 0.37
SEMA4DQ92854 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC17.35■□□□□ 0.37
SEMA4DQ92854 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 LRRFIP1P1-201ENST00000498774 2246 ntBASIC17.35■□□□□ 0.37
SEMA4DQ92854 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SEMA4DQ92854 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC17.34■□□□□ 0.37
SEMA4DQ92854 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.34■□□□□ 0.37
SEMA4DQ92854 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
SEMA4DQ92854 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SEMA4DQ92854 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.34■□□□□ 0.37
SEMA4DQ92854 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SEMA4DQ92854 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.34■□□□□ 0.37
SEMA4DQ92854 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.34■□□□□ 0.37
SEMA4DQ92854 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SEMA4DQ92854 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.34■□□□□ 0.37
SEMA4DQ92854 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms