Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 KRT18P35-201ENST00000510488 1269 ntBASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 RMI2-205ENST00000576027 818 ntTSL 2 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 AL445228.2-201ENST00000605589 952 ntBASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC16.12■□□□□ 0.17
CKAP2Q8WWK9 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 AC005912.2-201ENST00000619492 2400 ntBASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 DRAXINP1-201ENST00000437611 948 ntBASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 AL589182.2-201ENST00000619332 1049 ntBASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 AL022326.1-202ENST00000641533 845 ntBASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 AC104581.4-201ENST00000623126 3052 ntBASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 KRT18P1-202ENST00000452408 1331 ntBASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 KRT8P44-201ENST00000441609 1350 ntBASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 PI4KAP1-204ENST00000612579 1703 ntBASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 AP005117.1-201ENST00000584346 1413 ntBASIC16.11■□□□□ 0.17
CKAP2Q8WWK9 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 AC022616.7-201ENST00000525383 220 ntBASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 TPSP2-201ENST00000561760 610 ntBASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 AC005412.3-201ENST00000580309 715 ntBASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 AC139749.1-202ENST00000617529 3139 ntBASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CKAP2Q8WWK9 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms