Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 AL133267.1-201ENST00000398220 340 ntBASIC16.18■□□□□ 0.18
CHD5Q8TDI0 AL589987.1-201ENST00000453380 819 ntBASIC16.18■□□□□ 0.18
CHD5Q8TDI0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.18■□□□□ 0.18
CHD5Q8TDI0 AC009118.2-201ENST00000613275 655 ntBASIC16.18■□□□□ 0.18
CHD5Q8TDI0 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
CHD5Q8TDI0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 AL607033.1-201ENST00000623900 1599 ntBASIC16.17■□□□□ 0.18
CHD5Q8TDI0 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 RNA5SP421-201ENST00000516864 134 ntBASIC16.17■□□□□ 0.18
CHD5Q8TDI0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 AC009090.5-201ENST00000624886 2285 ntBASIC16.17■□□□□ 0.18
CHD5Q8TDI0 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.17■□□□□ 0.18
CHD5Q8TDI0 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 AC008894.3-201ENST00000624324 3103 ntBASIC16.16■□□□□ 0.18
CHD5Q8TDI0 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 BASP1P1-201ENST00000430708 665 ntBASIC16.16■□□□□ 0.18
CHD5Q8TDI0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 MEIS3P1-201ENST00000495167 958 ntBASIC16.16■□□□□ 0.18
CHD5Q8TDI0 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CHD5Q8TDI0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CHD5Q8TDI0 AC074338.1-201ENST00000416825 156 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms