Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 AC112693.3-201ENST00000624819 1983 ntBASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 AL365209.1-201ENST00000624418 6473 ntBASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 AC022616.7-201ENST00000525383 220 ntBASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 AC092127.1-201ENST00000567093 3455 ntBASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CNIH3Q8TBE1 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CNIH3Q8TBE1 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CNIH3Q8TBE1 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CNIH3Q8TBE1 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CNIH3Q8TBE1 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CNIH3Q8TBE1 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CNIH3Q8TBE1 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CNIH3Q8TBE1 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC14.83□□□□□ -0.03
CNIH3Q8TBE1 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.83□□□□□ -0.03
CNIH3Q8TBE1 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CNIH3Q8TBE1 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CNIH3Q8TBE1 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CNIH3Q8TBE1 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 NSUN5P1-202ENST00000421140 1535 ntBASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 NSUN5P2-203ENST00000457352 1529 ntBASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 C18orf15-201ENST00000623680 2534 ntBASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 CHCHD2P8-201ENST00000429873 447 ntBASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 AC114341.1-201ENST00000618070 349 ntBASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CNIH3Q8TBE1 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CNIH3Q8TBE1 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms