Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 INGX-202ENST00000489074 768 ntBASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 AC008738.7-201ENST00000609744 511 ntBASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ARHGEF39Q8N4T4 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 AZGP1P1-201ENST00000411909 902 ntBASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 SERBP1P3-201ENST00000459980 809 ntBASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 FXR1-221ENST00000491674 365 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 HFE2-206ENST00000634927 506 ntTSL 4 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 AC011477.6-201ENST00000604980 1927 ntBASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 AL603832.2-201ENST00000566195 2125 ntBASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ARHGEF39Q8N4T4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 TMPRSS11CP-201ENST00000453277 683 ntBASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 RN7SL618P-201ENST00000477850 296 ntBASIC15.18■□□□□ 0.02
ARHGEF39Q8N4T4 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms