Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 TOP3BP1-201ENST00000420768 1380 ntBASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 LAGE3P1-201ENST00000425356 484 ntBASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 BX005266.1-201ENST00000473402 457 ntBASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 AC006557.2-201ENST00000592985 1240 ntBASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 KRT8P39-201ENST00000396270 1433 ntBASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 SIGLEC16-201ENST00000599858 1437 ntBASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
DEPDC4Q8N2C3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 SNX33P1-201ENST00000592116 1762 ntBASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 SPDYE21P-201ENST00000413323 827 ntBASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 PMS2P1-201ENST00000431037 1228 ntBASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 S100A2-206ENST00000497140 697 ntTSL 2 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 AC105339.3-201ENST00000560043 636 ntBASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 PGM5P2-202ENST00000637225 1043 ntBASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 AC107918.4-202ENST00000641623 219 ntBASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 REXO1L8P-201ENST00000604378 1897 ntBASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 AL161772.1-201ENST00000610494 4412 ntBASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
DEPDC4Q8N2C3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.15■□□□□ 0.02
DEPDC4Q8N2C3 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
DEPDC4Q8N2C3 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
DEPDC4Q8N2C3 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
DEPDC4Q8N2C3 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DEPDC4Q8N2C3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.15■□□□□ 0.02
DEPDC4Q8N2C3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DEPDC4Q8N2C3 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DEPDC4Q8N2C3 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DEPDC4Q8N2C3 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
DEPDC4Q8N2C3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms