Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 CICP13-201ENST00000422015 2789 ntBASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
NUDCD3Q8IVD9 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 FOSL1P1-201ENST00000511041 816 ntBASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
NUDCD3Q8IVD9 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 AC087481.3-201ENST00000602886 1894 ntBASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 AC006557.2-201ENST00000592985 1240 ntBASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 PCDHA3-202ENST00000532566 4594 ntBASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 AC012569.1-201ENST00000591191 1524 ntBASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
NUDCD3Q8IVD9 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms