Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 PRAL-201ENST00000624952 3286 ntBASIC15.22■□□□□ 0.03
CCDC71Q8IV32 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CCDC71Q8IV32 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 MIR770-201ENST00000390219 98 ntBASIC15.21■□□□□ 0.03
CCDC71Q8IV32 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 AC004461.1-201ENST00000412461 403 ntBASIC15.21■□□□□ 0.03
CCDC71Q8IV32 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 AC004835.2-201ENST00000603762 682 ntBASIC15.21■□□□□ 0.03
CCDC71Q8IV32 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
CCDC71Q8IV32 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.21■□□□□ 0.02
CCDC71Q8IV32 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC15.21■□□□□ 0.02
CCDC71Q8IV32 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC15.21■□□□□ 0.02
CCDC71Q8IV32 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC71Q8IV32 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CCDC71Q8IV32 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC71Q8IV32 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC71Q8IV32 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
CCDC71Q8IV32 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC71Q8IV32 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC71Q8IV32 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.21■□□□□ 0.02
CCDC71Q8IV32 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
CCDC71Q8IV32 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC71Q8IV32 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC71Q8IV32 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC71Q8IV32 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CCDC71Q8IV32 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
CCDC71Q8IV32 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC71Q8IV32 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC71Q8IV32 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
CCDC71Q8IV32 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC71Q8IV32 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CCDC71Q8IV32 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.2■□□□□ 0.02
CCDC71Q8IV32 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC71Q8IV32 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC71Q8IV32 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC71Q8IV32 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CCDC71Q8IV32 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms