Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 COX20P2-201ENST00000452636 358 ntBASIC15.53■□□□□ 0.08
RAB43Q86YS6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.53■□□□□ 0.08
RAB43Q86YS6 AL390754.1-201ENST00000619088 582 ntBASIC15.53■□□□□ 0.08
RAB43Q86YS6 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.53■□□□□ 0.08
RAB43Q86YS6 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
RAB43Q86YS6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB43Q86YS6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RAB43Q86YS6 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB43Q86YS6 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RAB43Q86YS6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB43Q86YS6 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB43Q86YS6 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB43Q86YS6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB43Q86YS6 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB43Q86YS6 CYP2T1P-202ENST00000641596 2535 ntBASIC15.52■□□□□ 0.08
RAB43Q86YS6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RAB43Q86YS6 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB43Q86YS6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB43Q86YS6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB43Q86YS6 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
RAB43Q86YS6 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB43Q86YS6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RAB43Q86YS6 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
RAB43Q86YS6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB43Q86YS6 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.52■□□□□ 0.08
RAB43Q86YS6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB43Q86YS6 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.52■□□□□ 0.08
RAB43Q86YS6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.52■□□□□ 0.08
RAB43Q86YS6 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB43Q86YS6 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
RAB43Q86YS6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
RAB43Q86YS6 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
RAB43Q86YS6 LINC00895-201ENST00000629028 1637 ntBASIC15.52■□□□□ 0.08
RAB43Q86YS6 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RAB43Q86YS6 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.52■□□□□ 0.07
RAB43Q86YS6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB43Q86YS6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
RAB43Q86YS6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB43Q86YS6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB43Q86YS6 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.52■□□□□ 0.07
RAB43Q86YS6 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
RAB43Q86YS6 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB43Q86YS6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.52■□□□□ 0.07
RAB43Q86YS6 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB43Q86YS6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
RAB43Q86YS6 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
RAB43Q86YS6 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
RAB43Q86YS6 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
RAB43Q86YS6 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 AC138761.1-201ENST00000584393 385 ntBASIC15.51■□□□□ 0.07
RAB43Q86YS6 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
RAB43Q86YS6 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms