Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC136632.2-201ENST00000512891 861 ntBASIC14.7□□□□□ -0.06
SHFQ7M4L6 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 OR7E14P-202ENST00000530490 1290 ntBASIC14.7□□□□□ -0.06
SHFQ7M4L6 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 MIR1199-201ENST00000621445 119 ntBASIC14.7□□□□□ -0.06
SHFQ7M4L6 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
SHFQ7M4L6 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SHFQ7M4L6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC14.7□□□□□ -0.06
SHFQ7M4L6 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 AKR1C7P-201ENST00000305623 895 ntBASIC14.69□□□□□ -0.06
SHFQ7M4L6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 KRT18P27-201ENST00000427733 1299 ntBASIC14.69□□□□□ -0.06
SHFQ7M4L6 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 AF238378.1-201ENST00000526806 358 ntBASIC14.69□□□□□ -0.06
SHFQ7M4L6 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 TBCB-205ENST00000585746 875 ntTSL 3 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 PGM5P2-202ENST00000637225 1043 ntBASIC14.69□□□□□ -0.06
SHFQ7M4L6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 CICP13-201ENST00000422015 2789 ntBASIC14.69□□□□□ -0.06
SHFQ7M4L6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 AC099063.4-201ENST00000641099 1602 ntBASIC14.69□□□□□ -0.06
SHFQ7M4L6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.69□□□□□ -0.06
SHFQ7M4L6 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
SHFQ7M4L6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 AL592424.1-201ENST00000563624 1536 ntBASIC14.68□□□□□ -0.06
SHFQ7M4L6 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 AC008667.4-201ENST00000607370 168 ntBASIC14.68□□□□□ -0.06
SHFQ7M4L6 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 WT1-AS_2.1-201ENST00000613208 137 ntBASIC14.68□□□□□ -0.06
SHFQ7M4L6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC14.68□□□□□ -0.06
SHFQ7M4L6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SHFQ7M4L6 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms