Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TUBA1AQ71U36 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TUBA1AQ71U36 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.02■□□□□ -0
TUBA1AQ71U36 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.02■□□□□ -0
TUBA1AQ71U36 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC15.02■□□□□ -0
TUBA1AQ71U36 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
TUBA1AQ71U36 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
TUBA1AQ71U36 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TUBA1AQ71U36 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.02■□□□□ -0
TUBA1AQ71U36 AL022342.1-201ENST00000400363 863 ntBASIC15.02■□□□□ -0
TUBA1AQ71U36 NABP1-203ENST00000409510 843 ntTSL 5 BASIC15.02■□□□□ -0
TUBA1AQ71U36 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.02■□□□□ -0
TUBA1AQ71U36 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.02■□□□□ -0
TUBA1AQ71U36 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.02■□□□□ -0
TUBA1AQ71U36 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.02■□□□□ -0
TUBA1AQ71U36 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.02■□□□□ -0
TUBA1AQ71U36 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.02■□□□□ -0
TUBA1AQ71U36 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TUBA1AQ71U36 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TUBA1AQ71U36 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TUBA1AQ71U36 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.02□□□□□ -0.01
TUBA1AQ71U36 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.02□□□□□ -0.01
TUBA1AQ71U36 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.02□□□□□ -0.01
TUBA1AQ71U36 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TUBA1AQ71U36 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TUBA1AQ71U36 LINC00895-201ENST00000629028 1637 ntBASIC15.02□□□□□ -0.01
TUBA1AQ71U36 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.02□□□□□ -0.01
TUBA1AQ71U36 AC126755.1-201ENST00000525846 6405 ntBASIC15.02□□□□□ -0.01
TUBA1AQ71U36 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.02□□□□□ -0.01
TUBA1AQ71U36 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.02□□□□□ -0.01
TUBA1AQ71U36 PRAL-201ENST00000624952 3286 ntBASIC15.02□□□□□ -0.01
TUBA1AQ71U36 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 AC104109.2-201ENST00000602919 1418 ntBASIC15.01□□□□□ -0.01
TUBA1AQ71U36 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 PI4KAP1-204ENST00000612579 1703 ntBASIC15.01□□□□□ -0.01
TUBA1AQ71U36 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 RPL13AP23-201ENST00000480739 586 ntBASIC15.01□□□□□ -0.01
TUBA1AQ71U36 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 IGHV3-22-201ENST00000520721 359 ntBASIC15.01□□□□□ -0.01
TUBA1AQ71U36 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 UNC93B6-202ENST00000528242 690 ntBASIC15.01□□□□□ -0.01
TUBA1AQ71U36 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 BX640515.1-201ENST00000617215 977 ntBASIC15.01□□□□□ -0.01
TUBA1AQ71U36 AF228730.7-201ENST00000641842 219 ntBASIC15.01□□□□□ -0.01
TUBA1AQ71U36 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TUBA1AQ71U36 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TUBA1AQ71U36 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15□□□□□ -0.01
TUBA1AQ71U36 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
TUBA1AQ71U36 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15□□□□□ -0.01
TUBA1AQ71U36 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15□□□□□ -0.01
TUBA1AQ71U36 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms