Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 AC010507.1-201ENST00000633895 436 ntBASIC16.58■□□□□ 0.24
CASC4Q6P4E1 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CASC4Q6P4E1 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 PCDHA3-202ENST00000532566 4594 ntBASIC16.57■□□□□ 0.24
CASC4Q6P4E1 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 AL662844.1-201ENST00000546340 181 ntBASIC16.57■□□□□ 0.24
CASC4Q6P4E1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CASC4Q6P4E1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 AC112504.1-201ENST00000623415 1841 ntBASIC16.56■□□□□ 0.24
CASC4Q6P4E1 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 IGHV3-22-201ENST00000520721 359 ntBASIC16.56■□□□□ 0.24
CASC4Q6P4E1 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 AC096734.2-201ENST00000562054 433 ntBASIC16.56■□□□□ 0.24
CASC4Q6P4E1 AC023141.13-201ENST00000604991 943 ntBASIC16.56■□□□□ 0.24
CASC4Q6P4E1 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 AP005117.1-202ENST00000581724 1908 ntBASIC16.56■□□□□ 0.24
CASC4Q6P4E1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
CASC4Q6P4E1 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms