Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.77□□□□□ -0.04
NIPAL3Q6P499 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
NIPAL3Q6P499 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.77□□□□□ -0.04
NIPAL3Q6P499 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.77□□□□□ -0.04
NIPAL3Q6P499 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.77□□□□□ -0.04
NIPAL3Q6P499 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.77□□□□□ -0.04
NIPAL3Q6P499 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NIPAL3Q6P499 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NIPAL3Q6P499 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NIPAL3Q6P499 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
NIPAL3Q6P499 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 COX5A-206ENST00000568783 571 ntTSL 3 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 MIR3909-201ENST00000579518 119 ntBASIC14.77□□□□□ -0.05
NIPAL3Q6P499 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 RPS15-207ENST00000591032 550 ntTSL 3 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 RPS15-212ENST00000593052 629 ntTSL 2 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 AL009183.1-201ENST00000603760 355 ntBASIC14.77□□□□□ -0.05
NIPAL3Q6P499 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
NIPAL3Q6P499 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 AL592424.1-201ENST00000563624 1536 ntBASIC14.76□□□□□ -0.05
NIPAL3Q6P499 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 AL513477.1-201ENST00000602865 2407 ntBASIC14.76□□□□□ -0.05
NIPAL3Q6P499 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 PRAL-201ENST00000624952 3286 ntBASIC14.76□□□□□ -0.05
NIPAL3Q6P499 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
NIPAL3Q6P499 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NIPAL3Q6P499 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NIPAL3Q6P499 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
NIPAL3Q6P499 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NIPAL3Q6P499 AC068587.6-202ENST00000641839 5619 ntBASIC14.75□□□□□ -0.05
NIPAL3Q6P499 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
NIPAL3Q6P499 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC14.75□□□□□ -0.05
NIPAL3Q6P499 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
NIPAL3Q6P499 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NIPAL3Q6P499 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
NIPAL3Q6P499 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
NIPAL3Q6P499 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
NIPAL3Q6P499 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 225.3 ms