Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 DBET-201ENST00000630918 3363 ntBASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 FOXO1B-201ENST00000504678 1527 ntBASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 MED15P5-201ENST00000423150 992 ntBASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 KRT18P3-201ENST00000451602 1288 ntBASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 AC112191.1-201ENST00000523689 701 ntBASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 AC106730.1-201ENST00000566722 1090 ntBASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 AC073389.1-201ENST00000595595 795 ntBASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 AC027601.4-201ENST00000611259 610 ntBASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 CICP13-201ENST00000422015 2789 ntBASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 PPT1-215ENST00000641471 2368 ntBASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
LETMD1Q6P1Q0 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 AL591424.1-201ENST00000442569 1213 ntBASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 RARRES2P8-201ENST00000566335 367 ntBASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 AC022532.1-201ENST00000624563 1728 ntBASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
LETMD1Q6P1Q0 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms