Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.81□□□□□ -0.04
LTBQ06643 AC074386.1-202ENST00000463561 864 ntBASIC14.81□□□□□ -0.04
LTBQ06643 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC14.81□□□□□ -0.04
LTBQ06643 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.81□□□□□ -0.04
LTBQ06643 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
LTBQ06643 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC14.81□□□□□ -0.04
LTBQ06643 AL078644.1-201ENST00000609881 752 ntBASIC14.81□□□□□ -0.04
LTBQ06643 AC093512.1-201ENST00000617969 520 ntBASIC14.81□□□□□ -0.04
LTBQ06643 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC14.81□□□□□ -0.04
LTBQ06643 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC14.81□□□□□ -0.04
LTBQ06643 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC14.81□□□□□ -0.04
LTBQ06643 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.81□□□□□ -0.04
LTBQ06643 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.81□□□□□ -0.04
LTBQ06643 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LTBQ06643 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC14.81□□□□□ -0.04
LTBQ06643 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC14.81□□□□□ -0.04
LTBQ06643 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 AC063926.3-201ENST00000624734 5658 ntBASIC14.81□□□□□ -0.04
LTBQ06643 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LTBQ06643 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LTBQ06643 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
LTBQ06643 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
LTBQ06643 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
LTBQ06643 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.8□□□□□ -0.04
LTBQ06643 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.8□□□□□ -0.04
LTBQ06643 TSEN15P1-201ENST00000423257 515 ntBASIC14.8□□□□□ -0.04
LTBQ06643 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.8□□□□□ -0.04
LTBQ06643 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.8□□□□□ -0.04
LTBQ06643 PDPK2P-202ENST00000562415 1191 ntBASIC14.8□□□□□ -0.04
LTBQ06643 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.8□□□□□ -0.04
LTBQ06643 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
LTBQ06643 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC14.8□□□□□ -0.04
LTBQ06643 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.8□□□□□ -0.04
LTBQ06643 AF228730.6-201ENST00000641497 218 ntBASIC14.8□□□□□ -0.04
LTBQ06643 AC084121.3-201ENST00000641716 218 ntBASIC14.8□□□□□ -0.04
LTBQ06643 AC105233.6-201ENST00000642093 218 ntBASIC14.8□□□□□ -0.04
LTBQ06643 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.8□□□□□ -0.04
LTBQ06643 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
LTBQ06643 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.8□□□□□ -0.04
LTBQ06643 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.8□□□□□ -0.04
LTBQ06643 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.8□□□□□ -0.04
LTBQ06643 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LTBQ06643 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.8□□□□□ -0.04
LTBQ06643 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LTBQ06643 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms