Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC16.93■□□□□ 0.3
IRX4P78413 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 AC005052.1-201ENST00000625181 2492 ntBASIC16.93■□□□□ 0.3
IRX4P78413 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC16.93■□□□□ 0.3
IRX4P78413 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.93■□□□□ 0.3
IRX4P78413 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
IRX4P78413 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC16.93■□□□□ 0.3
IRX4P78413 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.93■□□□□ 0.3
IRX4P78413 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
IRX4P78413 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.92■□□□□ 0.3
IRX4P78413 AC126755.1-201ENST00000525846 6405 ntBASIC16.92■□□□□ 0.3
IRX4P78413 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.92■□□□□ 0.3
IRX4P78413 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
IRX4P78413 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.92■□□□□ 0.3
IRX4P78413 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
IRX4P78413 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
IRX4P78413 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 EDF1-203ENST00000371649 790 ntTSL 2 BASIC16.92■□□□□ 0.3
IRX4P78413 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.92■□□□□ 0.3
IRX4P78413 KRT18P32-201ENST00000424695 1287 ntBASIC16.92■□□□□ 0.3
IRX4P78413 UGT1A2P-201ENST00000454886 866 ntBASIC16.92■□□□□ 0.3
IRX4P78413 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.92■□□□□ 0.3
IRX4P78413 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.92■□□□□ 0.3
IRX4P78413 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.92■□□□□ 0.3
IRX4P78413 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.92■□□□□ 0.3
IRX4P78413 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.92■□□□□ 0.3
IRX4P78413 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.92■□□□□ 0.3
IRX4P78413 AL512356.2-201ENST00000546955 174 ntBASIC16.92■□□□□ 0.3
IRX4P78413 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.92■□□□□ 0.3
IRX4P78413 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.92■□□□□ 0.3
IRX4P78413 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC16.92■□□□□ 0.3
IRX4P78413 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.92■□□□□ 0.3
IRX4P78413 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.92■□□□□ 0.3
IRX4P78413 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
IRX4P78413 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.92■□□□□ 0.3
IRX4P78413 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.92■□□□□ 0.3
IRX4P78413 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.92■□□□□ 0.3
IRX4P78413 AC007950.2-201ENST00000615045 2347 ntBASIC16.92■□□□□ 0.3
IRX4P78413 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
IRX4P78413 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
IRX4P78413 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
IRX4P78413 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.91■□□□□ 0.3
IRX4P78413 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.91■□□□□ 0.3
IRX4P78413 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
IRX4P78413 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.91■□□□□ 0.3
IRX4P78413 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.91■□□□□ 0.3
IRX4P78413 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.91■□□□□ 0.3
IRX4P78413 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.91■□□□□ 0.3
IRX4P78413 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
IRX4P78413 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 AC140658.5-201ENST00000438532 169 ntBASIC16.91■□□□□ 0.3
IRX4P78413 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.91■□□□□ 0.3
IRX4P78413 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.91■□□□□ 0.3
IRX4P78413 KLF2P3-201ENST00000451977 1087 ntBASIC16.91■□□□□ 0.3
IRX4P78413 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
IRX4P78413 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC16.91■□□□□ 0.3
IRX4P78413 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.91■□□□□ 0.3
IRX4P78413 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.91■□□□□ 0.3
IRX4P78413 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.91■□□□□ 0.3
IRX4P78413 AC243562.1-201ENST00000560672 389 ntBASIC16.91■□□□□ 0.3
IRX4P78413 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
IRX4P78413 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms